Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_2058 |
Symbol | |
ID | 3581733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | - |
Start bp | 2409773 |
End bp | 2411215 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637685754 |
Product | hypothetical protein |
Protein accession | YP_290114 |
Protein GI | 72162457 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00793169 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACTGA TCGCCAGCGC AGCCGAGATG CGTGCCATCC CCCGTTCGAA GGAGTTCCGC AACGGTGCGG TGTCCTTCTG GTACCGCGAA CTGGGGCTTC CGAAACGGCG TGCCGCCCTG CCCGGTGACG CCGACTACGA CGTCTGCATC GTCGGTGCCG GATACACCGG GCTGTGGACC GCCTACTACC TCAAGAAAGA GCAGCCCGAC CTGCGCATCG CGATCCTCGA GCGGGAATTC GCGGGCTTCG GCGCCTCCGG GCGGAACGGC GGCTGGCTGT CCGCGGAGTT CGCTGGCTCC CGGGAGCGCT ACGCCAAAGA GCACGGCAAA GGGGCGGTGA TCGCCCTGCA GCGCGCCATG ATGGCTACGG TCGACGAAGT CATCACGGTC GCCAAGGACG AAGGCATCGA CGCCGACATC GTCAAGGGCG GCATGCGCAT CGTCGCCACC AACCACGCAC AGAAGGCCCG CCTGCTCCAG GAGATCGCCT ACCTGCAGGA GTGGGGCTAC TGGCCGGAGG ACTACTACCT CTTGGAGCCC GACTACGAGC CGATGCTGCG GGTCGACGGG GCAGTGGCGG AAGCGTTCAG CCCGCACGCC GCGCGCATCC ACCCCGCCAA GCTGGTCCGC GGCCTGGCCG CCGTGGTGGA GAACCTCGGC GTGGACATCT TCGAAGGCAC CGCCGTCACG GAACTGCGGC CGCGCAAGGA CGCGCAGCGG CCAGCCGCGG TCGCCGAACA GGGCACGGTA CGGGCCGACT ATGTCATCCG CGCCACGGAG GGGTTCACCG CGGAGATTGC CGGCTACCGG CGCCAGTGGC TGCCCATGAA CTCCTCGATG ATCGTGACCG AGCCGCTCAG CCCGGAGGTG TGGAAGCGCA TCGGCTGGGA GGGGCACGAA GTGCTCGGGG ACGCCGCCCA CGCCTACATC TACGCGCAGC GCACCGCGGA CGGCCGTATC GCGATCGGGG GGCGCGGGGT CCCCTACCGG TTCGGGTCCG GCCACGACAC CAACGGCGCG ACCCAGCCGC AGGCGATCGC GGAACTGTGG CGGGCGCTGG CTCGGCTGTT CCCGGCGGCG AGCGAGGCCC CGGTGGTCCA CGCTTGGTCC GGGGTCTTGG GCGTGCCGCG GGACTGGTGC CCCAGCGTGT ACCTGGACCG CACCAGCGGA CTGGGCTGGG CCGGGGGATA CGTCGGCAGC GGGGTTGCCA CCTCCAACCT GGCGGGGCGC ACGCTGCGCG ATCTCGTCCT GGAGCGGAAC ACGGACCTGA CGCGGCTGCC GTGGGTGGGC CACCGGGCAC GCGACTGGGA GCCGGAGCCG CTGCGCTGGA TCGGCACCCA CCTCGTCTAC GGCCTCTACC GCGGCGCTGA CCGCCGTGAG GCATCCCGCA CGCTTGAGAC GTCCACGCTG GCCGAGCTGG CCACCAAGCT CGCCGGACGC TGA
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Protein sequence | MRLIASAAEM RAIPRSKEFR NGAVSFWYRE LGLPKRRAAL PGDADYDVCI VGAGYTGLWT AYYLKKEQPD LRIAILEREF AGFGASGRNG GWLSAEFAGS RERYAKEHGK GAVIALQRAM MATVDEVITV AKDEGIDADI VKGGMRIVAT NHAQKARLLQ EIAYLQEWGY WPEDYYLLEP DYEPMLRVDG AVAEAFSPHA ARIHPAKLVR GLAAVVENLG VDIFEGTAVT ELRPRKDAQR PAAVAEQGTV RADYVIRATE GFTAEIAGYR RQWLPMNSSM IVTEPLSPEV WKRIGWEGHE VLGDAAHAYI YAQRTADGRI AIGGRGVPYR FGSGHDTNGA TQPQAIAELW RALARLFPAA SEAPVVHAWS GVLGVPRDWC PSVYLDRTSG LGWAGGYVGS GVATSNLAGR TLRDLVLERN TDLTRLPWVG HRARDWEPEP LRWIGTHLVY GLYRGADRRE ASRTLETSTL AELATKLAGR
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