Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_1354 |
Symbol | |
ID | 3580368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1570757 |
End bp | 1571593 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637685051 |
Product | transmembrane transport protein |
Protein accession | YP_289415 |
Protein GI | 72161758 |
COG category | [R] General function prediction only |
COG ID | [COG0385] Predicted Na+-dependent transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCTTC TCCCCGTCCT CATCGACGCG GCAGTCGTGG TGTTCTCCGT GTCCTCCATG CTGTCCGTGG GATTGGGGAA CCCCGCAAGA GAGCTTGTAC AGCGGCTGCG CGCCACCTCC CGCGTGGTGC GGGCCGTGGC CGCCAACTTC GTGCTGGTGC CGCTGCTCGC CGTCGCCGTG ACCCGGCTGA TGCCGCTCGC CCCGCCGCTA GCAACCGGGC TGCTGCTCGT CGCCACCGCG GCCGGGGCGC CGTTCCTCAT CAAACTCACC GAAGTCGCGG AAGGGGAGAT GGGCTCCAGC ACCGCACTGC TCGTGGTGCT GCTGCCGGTC ACCGTCCTCA CCATGCCGAT CGTGGTGCCG CTGCTCGTGT CGGGAACCAC GGTTTCTGCG GGAGCGATCG CGGTCCCGCT GCTGGTGACC ATGCTGCTGC CGCTCGCGGT GGGAATGGTG TTGCGGGAGT GGCGTCCGAC ATGGGAGCAG ATGCTGCGGC CCGTGTTGAC GAAAACGTCG ACGGTCGCCC TGCTGCTGCT CGTGGCGGCC ACAGTCCTAG CGAACTCCAC AGCCATCACC GACTTGGTGG TGCAGGGGGC GCTGCTGCCC GCGCTGCTGG TTATCGGGGG CGCGTTCGGG ATCGGCTACC TGCTCGGCGG CTCGGATGCC CGGTTCCGGG AGGTGCTCGG ACTGGGAACT TCGCAGCGGA ACATTGCGGC GGCCACCGTA GTGGCCACCC AGAGCTTCGC CGACCCCCGC ATCGTGGTGA TGGTGGTCGT CACCTCGCTT GTAGGGTTCG CGGTGCTCTT CCCGGTCGCG GCACTGTTCC GCAAGCGGAG GTCGTGA
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Protein sequence | MRLLPVLIDA AVVVFSVSSM LSVGLGNPAR ELVQRLRATS RVVRAVAANF VLVPLLAVAV TRLMPLAPPL ATGLLLVATA AGAPFLIKLT EVAEGEMGSS TALLVVLLPV TVLTMPIVVP LLVSGTTVSA GAIAVPLLVT MLLPLAVGMV LREWRPTWEQ MLRPVLTKTS TVALLLLVAA TVLANSTAIT DLVVQGALLP ALLVIGGAFG IGYLLGGSDA RFREVLGLGT SQRNIAAATV VATQSFADPR IVVMVVVTSL VGFAVLFPVA ALFRKRRS
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