Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0009 |
Symbol | |
ID | 3579771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 13759 |
End bp | 14910 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637683690 |
Product | putative transferase |
Protein accession | YP_288072 |
Protein GI | 72160415 |
COG category | [M] Cell wall/membrane/envelope biogenesis [R] General function prediction only |
COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase [COG1778] Low specificity phosphatase (HAD superfamily) |
TIGRFAM ID | [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA [TIGR01670] 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.848658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGTTG TCGCCGTCAT ACCCGCACGA GGAGGATCCA AGGGGGTCCC CCTGAAGAAC CTCGCCAGAG TAGGCGGCCG CCCTCTGGTG GCGCGCGCAG TGGACGCTTG CCGCCGCGCC GACCTCGTCG ACATGGTGGT TGTCTCCACC GACCATGACG GCATCGCCGC AGTCGCCCGC GACGCCGGGG CCACCGTGGT GGAACGCCCT GCCGACCTGG GCGCGGACAC CGCGTCCTCC GAGTCGGTGC TGCTGCACGC CCTCGACCGG CTCGCGGAAG ACGGCATCAA CCCGCAGATC CTGGTCTTCG TCCAGTGCAC CAGCCCGTTC ATCGACCCCG CTGACCTGGA CGACGCGGTG CGGCAGGTCC GCGACGACCT GGCCGACTCG GTGTTCTCCG CCGTGGAAAC CTACGAGTTC CTGTGGCACA TCACCCCCGA TGGGGCACGC GGGGTCAACC ATGACCACAC CTACCGGCCG CGCCGCCAGG ACCGCGCCCC GCATTACCGG GAGACCGGAG CGTTCTACGT GCTGCGCGTC TCCGGTTTCC GCGAGCACCA GCACCGGTTC TTCGGCCGTA TCGCCGTGCA GCAGGTCAAC CCCGCCCACG CGGTGGAAGT GGACTCGGTC GAGGAACTGG ACCTGGCCTG CGCGGTCGCC CGTGCACTGG ACCGGGAAGA ACCGTTGGAC GTCGACGCCG TGGTCACCGA TTTCGACGGT GTGCACACCG ACGACCGCGT CTACGTGGAC CAGGACGGAC GTGAAACGGT GGTGGTGAAC CGCGGTGACG GTATGGGGGT GAGCCTGCTC CTTAAGGCAG GTATCCGCGT GTGCATTCTC TCCACCGAGG TCAACTCGGT GGTGCGGGCG CGTGCACGAA AACTAGGTGT CCCTGTGATG CACGGGCTGA GCGACAAGCG CACAGCCCTG CTCCAGTGGA TGGCCGACGA AGGGCTCGAC CCAGCCCGCG TCGCCTACGT CGGAAACGAC GTGAATGACC TCGGTTGCCT GGCCGAGGTC GGATGGCCGA TCGCGGTCCC GGACTCCCAT CCGGATGTCC TCGCCGCGGC CCGGCTTGTT CTGACCCGTC CCGGAGGCTC CGGGGCGGTC CGCGAGATCT GTGAACGCGT CCTCGCGGCA CGCAAAGGAT AG
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Protein sequence | MSVVAVIPAR GGSKGVPLKN LARVGGRPLV ARAVDACRRA DLVDMVVVST DHDGIAAVAR DAGATVVERP ADLGADTASS ESVLLHALDR LAEDGINPQI LVFVQCTSPF IDPADLDDAV RQVRDDLADS VFSAVETYEF LWHITPDGAR GVNHDHTYRP RRQDRAPHYR ETGAFYVLRV SGFREHQHRF FGRIAVQQVN PAHAVEVDSV EELDLACAVA RALDREEPLD VDAVVTDFDG VHTDDRVYVD QDGRETVVVN RGDGMGVSLL LKAGIRVCIL STEVNSVVRA RARKLGVPVM HGLSDKRTAL LQWMADEGLD PARVAYVGND VNDLGCLAEV GWPIAVPDSH PDVLAAARLV LTRPGGSGAV REICERVLAA RKG
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