More than 300 homologs were found in PanDaTox collection
for query gene Tfu_0009 on replicon NC_007333
Organism: Thermobifida fusca YX



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007333  Tfu_0009  putative transferase  100 
 
 
383 aa  760    Thermobifida fusca YX  Bacteria  normal  0.848658  n/a   
 
 
-
 
NC_013595  Sros_3318  Sialic acid synthase-like protein  67.03 
 
 
672 aa  488  1e-136  Streptosporangium roseum DSM 43021  Bacteria  normal  0.785348  normal  0.206825 
 
 
-
 
NC_013174  Jden_0844  acylneuraminate cytidylyltransferase  52.47 
 
 
423 aa  355  8.999999999999999e-97  Jonesia denitrificans DSM 20603  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_1278  CMP-N-acetylneuraminic acid synthetase  34.78 
 
 
387 aa  214  2.9999999999999995e-54  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4941  N-acylneuraminate cytidylyltransferase  40.72 
 
 
230 aa  189  5.999999999999999e-47  Cyanothece sp. PCC 7425  Bacteria  normal  0.490996  normal 
 
 
-
 
NC_013161  Cyan8802_0292  acylneuraminate cytidylyltransferase  41.4 
 
 
225 aa  187  2e-46  Cyanothece sp. PCC 8802  Bacteria  normal  normal 
 
 
-
 
NC_011726  PCC8801_0292  N-acylneuraminate cytidylyltransferase  41.4 
 
 
225 aa  187  3e-46  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_007512  Plut_0975  acylneuraminate cytidylyltransferase  44.24 
 
 
235 aa  160  4e-38  Chlorobium luteolum DSM 273  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1581  acylneuraminate cytidylyltransferase  42.42 
 
 
227 aa  159  5e-38  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_007516  Syncc9605_2217  putative acylneuraminate cytidylyltransferase  46.15 
 
 
226 aa  157  3e-37  Synechococcus sp. CC9605  Bacteria  normal  0.454172  normal  0.965631 
 
 
-
 
NC_008639  Cpha266_1514  acylneuraminate cytidylyltransferase  41.47 
 
 
233 aa  155  1e-36  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_010803  Clim_1387  acylneuraminate cytidylyltransferase  40.28 
 
 
241 aa  152  8e-36  Chlorobium limicola DSM 245  Bacteria  normal  0.661123  n/a   
 
 
-
 
NC_007514  Cag_1132  acylneuraminate cytidylyltransferase  37.61 
 
 
229 aa  150  4e-35  Chlorobium chlorochromatii CaD3  Bacteria  normal  n/a   
 
 
-
 
NC_007513  Syncc9902_0462  putative acylneuraminate cytidylyltransferase  44.89 
 
 
230 aa  149  1.0000000000000001e-34  Synechococcus sp. CC9902  Bacteria  normal  0.0890039  n/a   
 
 
-
 
NC_007577  PMT9312_1349  putative acylneuraminate cytidylyltransferase  33.04 
 
 
227 aa  144  2e-33  Prochlorococcus marinus str. MIT 9312  Bacteria  normal  0.272284  n/a   
 
 
-
 
NC_011060  Ppha_1484  acylneuraminate cytidylyltransferase  36.41 
 
 
237 aa  136  6.0000000000000005e-31  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.51038  n/a   
 
 
-
 
NC_011059  Paes_1024  acylneuraminate cytidylyltransferase  38.32 
 
 
229 aa  134  1.9999999999999998e-30  Prosthecochloris aestuarii DSM 271  Bacteria  normal  normal  0.261083 
 
 
-
 
NC_007614  Nmul_A0407  phosphatase kdsC  27.89 
 
 
401 aa  128  2.0000000000000002e-28  Nitrosospira multiformis ATCC 25196  Bacteria  normal  0.784801  n/a   
 
 
-
 
NC_013422  Hneap_0634  N-acylneuraminate cytidylyltransferase  38.64 
 
 
228 aa  122  7e-27  Halothiobacillus neapolitanus c2  Bacteria  normal  0.684247  n/a   
 
 
-
 
NC_008340  Mlg_2324  acylneuraminate cytidylyltransferase  36.52 
 
 
236 aa  120  4.9999999999999996e-26  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal  0.380587 
 
 
-
 
NC_009512  Pput_3909  3-deoxy-D-manno-octulosonate cytidylyltransferase  28.67 
 
 
428 aa  117  3e-25  Pseudomonas putida F1  Bacteria  normal  normal  0.790308 
 
 
-
 
NC_014230  CA2559_06120  acylneuraminate cytidylyltransferase  26.03 
 
 
352 aa  115  1.0000000000000001e-24  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_008009  Acid345_2842  phosphatase kdsC  42.86 
 
 
159 aa  113  6e-24  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  0.778626  normal 
 
 
-
 
NC_013922  Nmag_0148  acylneuraminate cytidylyltransferase  31.91 
 
 
232 aa  111  2.0000000000000002e-23  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_007204  Psyc_0656  putative acylneuraminate cytidylyltransferase  30.53 
 
 
228 aa  108  1e-22  Psychrobacter arcticus 273-4  Bacteria  normal  0.0382756  normal 
 
 
-
 
NC_007955  Mbur_1585  acylneuraminate cytidylyltransferase  27.6 
 
 
238 aa  108  2e-22  Methanococcoides burtonii DSM 6242  Archaea  normal  n/a   
 
 
-
 
NC_008709  Ping_2888  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family protein  36.91 
 
 
182 aa  106  7e-22  Psychromonas ingrahamii 37  Bacteria  normal  0.570231  normal  0.23574 
 
 
-
 
NC_013456  VEA_001797  N-Acetylneuraminate cytidylyltransferase  37.37 
 
 
230 aa  106  9e-22  Vibrio sp. Ex25  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_0052  acylneuraminate cytidylyltransferase  35.98 
 
 
230 aa  105  1e-21  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011060  Ppha_0534  acylneuraminate cytidylyltransferase  31.62 
 
 
234 aa  104  2e-21  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2288  phosphatase kdsC  40.25 
 
 
178 aa  105  2e-21  Synechococcus elongatus PCC 7942  Bacteria  normal  0.81133  normal 
 
 
-
 
NC_013889  TK90_0366  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  41.61 
 
 
179 aa  105  2e-21  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.239819 
 
 
-
 
NC_006368  lpp0901  hypothetical protein  37.34 
 
 
175 aa  103  4e-21  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_006369  lpl0870  hypothetical protein  37.34 
 
 
175 aa  103  4e-21  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_008609  Ppro_0970  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  40.41 
 
 
171 aa  103  5e-21  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00000697  n/a   
 
 
-
 
NC_009012  Cthe_2639  N-acylneuraminate cytidylyltransferase  28.76 
 
 
230 aa  103  5e-21  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0417  acylneuraminate cytidylyltransferase  29.28 
 
 
229 aa  103  6e-21  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_013440  Hoch_0345  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  42.76 
 
 
171 aa  102  8e-21  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.250737 
 
 
-
 
NC_010117  COXBURSA331_A1203  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  39.24 
 
 
165 aa  102  8e-21  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_008576  Mmc1_0559  acylneuraminate cytidylyltransferase  34.98 
 
 
229 aa  102  8e-21  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_009727  CBUD_0762  3-deoxy-manno-octulosonate-8-phosphatase  39.24 
 
 
165 aa  102  9e-21  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_008787  CJJ81176_1161  CMP-Neu5Ac synthetase  29.77 
 
 
221 aa  102  1e-20  Campylobacter jejuni subsp. jejuni 81-176  Bacteria  normal  0.0150139  n/a   
 
 
-
 
NC_009783  VIBHAR_00677  N-acylneuraminate cytidylyltransferase  35.75 
 
 
230 aa  102  1e-20  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_3400  acylneuraminate cytidylyltransferase  33.92 
 
 
248 aa  102  1e-20  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_014230  CA2559_07300  acylneuraminate cytidylyltransferase  32.23 
 
 
227 aa  102  2e-20  Croceibacter atlanticus HTCC2559  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1288  acylneuraminate cytidylyltransferase  29.77 
 
 
232 aa  101  2e-20  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_4539  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.29 
 
 
181 aa  101  3e-20  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_007796  Mhun_3094  acylneuraminate cytidylyltransferase  31.48 
 
 
226 aa  100  3e-20  Methanospirillum hungatei JF-1  Archaea  normal  normal  0.321644 
 
 
-
 
NC_007575  Suden_0599  acylneuraminate cytidylyltransferase  28.76 
 
 
238 aa  100  6e-20  Sulfurimonas denitrificans DSM 1251  Bacteria  normal  0.233395  n/a   
 
 
-
 
NC_013512  Sdel_2210  pseudaminic acid CMP-transferase  30.37 
 
 
232 aa  99.8  7e-20  Sulfurospirillum deleyianum DSM 6946  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_4851  acylneuraminate cytidylyltransferase  35.14 
 
 
238 aa  99.8  8e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.25473 
 
 
-
 
NC_011761  AFE_3029  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  36.75 
 
 
184 aa  99.4  1e-19  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_4449  phosphatase, YrbI family  37.5 
 
 
179 aa  99  1e-19  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.295684  n/a   
 
 
-
 
NC_011206  Lferr_2637  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  38.93 
 
 
180 aa  98.6  1e-19  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.36479  normal 
 
 
-
 
NC_010424  Daud_0021  acylneuraminate cytidylyltransferase  34.95 
 
 
233 aa  99  1e-19  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009135  MmarC5_0507  acylneuraminate cytidylyltransferase  28.05 
 
 
240 aa  99  1e-19  Methanococcus maripaludis C5  Archaea  normal  n/a   
 
 
-
 
NC_009997  Sbal195_3125  N-acylneuraminate cytidylyltransferase  35.38 
 
 
231 aa  98.6  2e-19  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2094  putative acylneuraminate cytidylyltransferase  30.87 
 
 
231 aa  98.6  2e-19  Colwellia psychrerythraea 34H  Bacteria  normal  0.0857675  n/a   
 
 
-
 
NC_009665  Shew185_2981  N-acylneuraminate cytidylyltransferase  35.38 
 
 
231 aa  98.6  2e-19  Shewanella baltica OS185  Bacteria  normal  0.0478934  n/a   
 
 
-
 
NC_010622  Bphy_3009  acylneuraminate cytidylyltransferase  34.48 
 
 
233 aa  98.6  2e-19  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007644  Moth_0758  acylneuraminate cytidylyltransferase  33.93 
 
 
233 aa  98.6  2e-19  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal  0.527075 
 
 
-
 
NC_007298  Daro_3419  HAD family phosphatase KdsC  37.5 
 
 
175 aa  97.4  3e-19  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0000000352034  normal  0.555707 
 
 
-
 
NC_008700  Sama_2336  N-acylneuraminate cytidylyltransferase  29.6 
 
 
232 aa  97.8  3e-19  Shewanella amazonensis SB2B  Bacteria  normal  0.177119  normal  0.565326 
 
 
-
 
NC_008740  Maqu_2711  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.95 
 
 
189 aa  97.4  3e-19  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1892  YrbI family phosphatase  37.5 
 
 
179 aa  97.4  4e-19  Geobacter sulfurreducens PCA  Bacteria  normal  0.333643  n/a   
 
 
-
 
NC_002947  PP_0956  YrbI family phosphatase  38.16 
 
 
174 aa  97.4  4e-19  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_0431  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  40.26 
 
 
175 aa  96.7  5e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.0425606 
 
 
-
 
NC_011901  Tgr7_0730  3-deoxy-manno-octulosonate-8-phosphatase  37.91 
 
 
174 aa  97.1  5e-19  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03189  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  37.25 
 
 
182 aa  96.7  7e-19  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_0861  phosphatase kdsC  38.16 
 
 
174 aa  96.7  7e-19  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_0963  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  37.5 
 
 
174 aa  96.3  9e-19  Pseudomonas putida GB-1  Bacteria  normal  normal 
 
 
-
 
NC_013522  Taci_1289  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  40 
 
 
162 aa  95.5  1e-18  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  hitchhiker  0.00177414  n/a   
 
 
-
 
NC_010501  PputW619_4259  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  36.84 
 
 
179 aa  95.5  1e-18  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_3811  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  36.6 
 
 
188 aa  95.9  1e-18  Dickeya zeae Ech1591  Bacteria  normal  0.266171  n/a   
 
 
-
 
NC_010159  YpAngola_A1149  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.29 
 
 
174 aa  95.5  1e-18  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_2789  phosphatase kdsC  36.3 
 
 
173 aa  95.9  1e-18  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.00135631  n/a   
 
 
-
 
NC_010501  PputW619_3709  N-acylneuraminate cytidylyltransferase  35.42 
 
 
241 aa  95.5  1e-18  Pseudomonas putida W619  Bacteria  normal  0.52779  normal 
 
 
-
 
NC_007519  Dde_3257  CMP-N-acetlyneuraminic acid synthetase  34.53 
 
 
232 aa  95.9  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_012560  Avin_12830  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  39.86 
 
 
174 aa  95.9  1e-18  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_4198  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  39.31 
 
 
165 aa  95.5  1e-18  Cyanothece sp. PCC 7425  Bacteria  normal  normal  0.707738 
 
 
-
 
NC_009524  PsycPRwf_0823  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  34.9 
 
 
175 aa  95.1  2e-18  Psychrobacter sp. PRwf-1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_3653  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.95 
 
 
188 aa  95.1  2e-18  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_0445  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.29 
 
 
187 aa  95.1  2e-18  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_3078  acylneuraminate cytidylyltransferase  29.26 
 
 
233 aa  95.1  2e-18  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_0509  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  35.29 
 
 
187 aa  95.1  2e-18  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_3634  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  37.58 
 
 
188 aa  95.1  2e-18  Enterobacter sp. 638  Bacteria  normal  normal  0.131299 
 
 
-
 
NC_009512  Pput_0995  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  37.5 
 
 
174 aa  94.7  2e-18  Pseudomonas putida F1  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_2627  acylneuraminate cytidylyltransferase  30.47 
 
 
234 aa  94.7  2e-18  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3084  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  34.64 
 
 
182 aa  94.4  3e-18  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.197903 
 
 
-
 
NC_012918  GM21_2607  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  37.34 
 
 
171 aa  94.4  3e-18  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008751  Dvul_1509  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  37.5 
 
 
175 aa  94.4  3e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  0.154844  decreased coverage  0.000600657 
 
 
-
 
NC_007406  Nwi_2397  acylneuraminate cytidylyltransferase  30.43 
 
 
249 aa  94  4e-18  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.520098  normal  0.461762 
 
 
-
 
NC_013730  Slin_4264  pseudaminic acid CMP-transferase  32.27 
 
 
233 aa  94  4e-18  Spirosoma linguale DSM 74  Bacteria  normal  normal  0.468178 
 
 
-
 
NC_009439  Pmen_0874  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase  38.16 
 
 
173 aa  93.6  5e-18  Pseudomonas mendocina ymp  Bacteria  normal  0.469255  normal 
 
 
-
 
NC_009441  Fjoh_0307  acylneuraminate cytidylyltransferase  29.05 
 
 
221 aa  94  5e-18  Flavobacterium johnsoniae UW101  Bacteria  normal  0.245282  n/a   
 
 
-
 
NC_007005  Psyr_4143  HAD family phosphatase YrbI  35.53 
 
 
169 aa  93.6  6e-18  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013204  Elen_1913  acylneuraminate cytidylyltransferase  32.39 
 
 
548 aa  93.2  7e-18  Eggerthella lenta DSM 2243  Bacteria  normal  hitchhiker  0.0000953718 
 
 
-
 
NC_007951  Bxe_A4118  phosphatase YrbI  34.55 
 
 
186 aa  93.2  7e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_2170  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family  36.84 
 
 
172 aa  93.2  7e-18  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_007520  Tcr_1455  acylneuraminate cytidylyltransferase  30.77 
 
 
240 aa  93.2  8e-18  Thiomicrospira crunogena XCL-2  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>