Gene Daro_3133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_3133 
Symbol 
ID3567634 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp3376025 
End bp3377071 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content62% 
IMG OID637681604 
Productcytochrome c, class I 
Protein accessionYP_286333 
Protein GI71908746 
COG category[C] Energy production and conversion 
COG ID[COG4654] Cytochrome c551/c552 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value0.460697 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGGT TCTCTAAAAC GATTCTGGTC CTGGCGCTAC TGGGGGCGTC GAGCACCGGT 
TTTTCCTTTG AAAACTTCAA AGGTGTCGGT CGACAGGCGA CCCCGGCCGA AGTGAAGGCC
TGGGACATCG ATGTTCGCCC CGACTTCAAG GGCCTGCCCA AGGGCAAGGG CAATGTCGAG
CGCGGCAACG AGCTGTTCGA GGAGAAGTGT GCGTCCTGCC ACGGCTCCTT CGGCGAGTCG
AATGAAGTGT TCACCCCGCT GGCCGGCGGC ACAACCAAGG ACGACATCAA GACTGGCCGC
GTCAAGGGCC TGTCCTCTGG TGAACTGCCG CAGCGTACGA CCTTCACCAA GGTGGCGACG
ATTTCGACGG TCTTCGACTA CATCCAGCGC GCCATGCCAT GGACGGCGCC GAAGTCGCTG
AAGCCGGACG ATGTTTACGC CATCCTGGCC TACCTGCTCA ATCTGCAGGA GATCGTGCCG
GCCGACTTCG AACTGTCCGA CAGGAACATT GCCGACGTCC AGAAGCTGCT GCCCAACCGC
AACGGCATGA CGACCGACCA CGGTCTGTGG CCTGGCGCCT CGGCCAAGAA GGGTGGCATT
GGCAACGGCG GCATTCCAGA CGTGAAGAAC GTGGCGTGCA TGAAGAACTG CAAGCCGGAA
GTGCAGATCG GTTCGACCCT GCCTGAGTAC GCCCGCACCG CGCATGGCGA GCTGGCTGAC
CAGAACCGCA ATTTCGGCGC TGTACGCGGT ACCCGTACGC TCGGCCCGGA AGCAGCGAAG
AAGGCGGCCG ATGCCGGCAC GCTGGAACTG GCCACGAAGA GCGGCTGCAT GGCCTGTCAC
GGCATGAAGA GCAAGATCGT CGGCCCCGGC TACAGCGAAG TCGTTGCCCG CTACCAGGGG
CAGCCCGACG CCGAATCCCG CCTGATCGCC AAGGTCAAGG CCGGTGGTCA GGGCGTCTGG
GGCTCGATCC CGATGCCGCC GAACGCTCAC GTCAAGGATG AAGACCTGAA GACACTGGTC
CAGTGGATTC TGGCTGGTTC CAAGTAA
 
Protein sequence
MSRFSKTILV LALLGASSTG FSFENFKGVG RQATPAEVKA WDIDVRPDFK GLPKGKGNVE 
RGNELFEEKC ASCHGSFGES NEVFTPLAGG TTKDDIKTGR VKGLSSGELP QRTTFTKVAT
ISTVFDYIQR AMPWTAPKSL KPDDVYAILA YLLNLQEIVP ADFELSDRNI ADVQKLLPNR
NGMTTDHGLW PGASAKKGGI GNGGIPDVKN VACMKNCKPE VQIGSTLPEY ARTAHGELAD
QNRNFGAVRG TRTLGPEAAK KAADAGTLEL ATKSGCMACH GMKSKIVGPG YSEVVARYQG
QPDAESRLIA KVKAGGQGVW GSIPMPPNAH VKDEDLKTLV QWILAGSK