Gene Daro_1277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1277 
Symbol 
ID3569345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1386501 
End bp1387061 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content61% 
IMG OID637679740 
Productsugar transferase 
Protein accessionYP_284499 
Protein GI71906912 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2148] Sugar transferases involved in lipopolysaccharide synthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.0679585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGTC TTTTTGATCT GGTTCTGGCG CTGGCCGCCG TTTGCATATT TGCCATTCCA 
CTGGCGGTGG TTGCCTTGCT GGTCAAGGCC ACTTCGCCGG GGCCGATCCT GTATTGGTCC
GATCGTGTCG GGCGGCACAA CCGGATATTC CGCATGCCGA AGTTCCGCAG CATGCGGGTC
GGCACGCCGG CCGTCGCCAC CCATCTGCTG AACAACCCCG CCACTCACCT GACGCCGATC
GGTTCGTTCC TGCGCCGTTC CAGCCTCGAT GAACTGCCGC AGGTTTGGAG TATATTGGTC
GGCGATATGA GCTTTGTCGG CCCGCGTCCG GCCTTGTTCA ACCAGGACGA CTTGGTCGCC
CTTCGCACCG AGGCGGGTGT TCACGAGTTG CAACCGGGTC TGACCGGGTG GGCGCAGGTC
AACGGCCGGG ATGAGTTGCC AATTCCACAG AAGGTCGCTC TCGATGTCGA ATATCTTCGC
CGGCAGAGCT TCTGGTTCGA TCTCCGGATC ATTTGGCTGA CCGCCCTCAA GGTCGTGAGA
AGCGACGGCG TTTCACATTA G
 
Protein sequence
MKRLFDLVLA LAAVCIFAIP LAVVALLVKA TSPGPILYWS DRVGRHNRIF RMPKFRSMRV 
GTPAVATHLL NNPATHLTPI GSFLRRSSLD ELPQVWSILV GDMSFVGPRP ALFNQDDLVA
LRTEAGVHEL QPGLTGWAQV NGRDELPIPQ KVALDVEYLR RQSFWFDLRI IWLTALKVVR
SDGVSH