| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0385 |
|---|
| Symbol | |
|---|
| ID | 3569856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 417174 |
|---|
| End bp | 417785 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637678827 |
|---|
| Product | phenylacetic acid degradation protein PaaY |
|---|
| Protein accession | YP_283614 |
|---|
| Protein GI | 71906027 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | [TIGR02287] phenylacetic acid degradation protein PaaY |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.00144851 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0147726 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAC TTCGCGTTTA TTCCATTGAC GGAATCGTCC CGGTGGTCGA TCCCACCGCC
TATGTCCACC CGAGTGCCGT GCTGATCGGC GATGTGATTG TCGGGACGGA TTGCTACGTC
GGTCCCTGCG CCAGCCTGCG GGGCGATTTC GGCCGACTGA TCCTGGAGGC CGGGGCGAAT
TTGCAGGACA CCTGCGTCAT GCACGGCTTT CCCGGCACCG ATACGGTGGT CGAGGAAAAC
GGCCACATCG GCCATGGTGC CGTGCTGCAC GGCTGCCGCA TCAAAAAGAA TGCGCTGATC
GGCATGAACG CCGTGATCAT GGACAACGCA GTGATCGGCG AGGCGAGCAT CGTCGCCGCC
TCGGCCTTCG TCAAGGCCAG CCAGGAAATC CCCCCCGGCG TGCTGGTCGC GGGTGTGCCG
GCCAAGGTGA TCCGCCCGCT GAGCGAACAG GAGATGGCCT GGAAGAGCGA TGGGACGCGG
ACCTATCAGG AACTGACCCG GCGCTGCCTG GCGACGATGG TCGAAACGAC CCCGCTGACG
GCGGTCGAGG CCGATCGCAA GCGGATCGAG ATGCCGGATG TCGTGCCGCT GACTGAACTG
AAGAACCGCT AG
|
|---|
| Protein sequence | MSKLRVYSID GIVPVVDPTA YVHPSAVLIG DVIVGTDCYV GPCASLRGDF GRLILEAGAN
LQDTCVMHGF PGTDTVVEEN GHIGHGAVLH GCRIKKNALI GMNAVIMDNA VIGEASIVAA
SAFVKASQEI PPGVLVAGVP AKVIRPLSEQ EMAWKSDGTR TYQELTRRCL ATMVETTPLT
AVEADRKRIE MPDVVPLTEL KNR
|
|---|
| |