Gene Daro_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0187 
Symbol 
ID3569483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp205055 
End bp206260 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content59% 
IMG OID637678625 
ProductHDIG 
Protein accessionYP_283416 
Protein GI71905829 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGA AAATACCAGT CGAAAAACTG ACGCTCGGCA TGCACCTCCA GGCTTTCTGC 
GGCGCCTGGC TGGATCATCC GTTCTGGCGG ACCAAGTTCG TCCTGACCGA CCCAAACGAT
CTGTGCCTGA TCAAGGAAAG CTCGATCAGG GAAGTCTGGA TCGACGCGTC CAAAGGTAGC
GACGTAGCAA CAGATGAGGT TGCCGGCACG ACAGAAATCG TCACCGCAGA GGAAATTCCC
GAACCACCTC CCGTTGTGCA GGAAAAGGCT TCGTTCAACG ACGAAGTCAA ACGCGCCGCC
AAGATTTGCG CCAAAGGCAA GGAAGCCGTC GTTTCGATGT TCCAGGAAGC GCGCATGGGA
AAGGCCATCG AGGCCGAAGC CGCCGCACCG CTGGTCGAGG AAATTTCCAA CTCCGTAATG
CGCAATCCGG GTGCCCTGAT CAGCCTGGCC CGCCTGAAGA CGGCTGACGA CTACACCTTC
ATGCATTCGG TGGCCGTCTG CGCCCTGATG ATCGCCCTCG CCCGCCAGCT TGGCCTCGAT
GATCGACAGG TCCGCGATGC CGGCATGGCC GGACTGCTGC ACGACCTGGG CAAGGCGATG
ATTCCGCTTG AAGTGCTGAA CAAGCCCAGC AAGCTGACCG ACGAGGAATT CGACTTGGTC
AAAACCCACC CTGAAGCGGG CTACAAGTTG CTGCTCGAGG GCAACGGCAT CAGCGAAATG
ACCAAGGATG TCTGCCTGCA CCACCATGAA AAAATCGATG GCAGCGGCTA CCCGAAAGGA
CTGAACAGCG ACACGATGAG TCTGTTCGCC AAGATGGGGG CTGTCTGCGA CGTTTACGAC
GCGGTCACCT CCAACCGTCC CTACAAGGCG GGCTGGGATC CGGCTGAGTC GATCAAACGG
ATGGCGGAAT GGAAGGGGCA TTTCGACCCA TCCGTCTTCC AGGCCTTCGT CAAGAGCCTG
GGCATCTACC CGATCGGCTC CTTCGTTCGC CTGGAGTCTG GCAAGCTCGG CGTGGTCATC
GAACAAGGCG AGCAATCGCT GCTCAAACCC AAGGTCAAAG TCTTTTTCTC GACCAAATCG
CAAGCCTACA TCCGCCCGGA AACCATCGAT CTCGCCCGCA GCCCCGAGAA AATTGCCGGC
CGCGAAGATG CCGCCAAATG GGGCATCAAG GATGTCGACC GCTACTGGGC TGGCGACAAG
GCTTGA
 
Protein sequence
MLKKIPVEKL TLGMHLQAFC GAWLDHPFWR TKFVLTDPND LCLIKESSIR EVWIDASKGS 
DVATDEVAGT TEIVTAEEIP EPPPVVQEKA SFNDEVKRAA KICAKGKEAV VSMFQEARMG
KAIEAEAAAP LVEEISNSVM RNPGALISLA RLKTADDYTF MHSVAVCALM IALARQLGLD
DRQVRDAGMA GLLHDLGKAM IPLEVLNKPS KLTDEEFDLV KTHPEAGYKL LLEGNGISEM
TKDVCLHHHE KIDGSGYPKG LNSDTMSLFA KMGAVCDVYD AVTSNRPYKA GWDPAESIKR
MAEWKGHFDP SVFQAFVKSL GIYPIGSFVR LESGKLGVVI EQGEQSLLKP KVKVFFSTKS
QAYIRPETID LARSPEKIAG REDAAKWGIK DVDRYWAGDK A