| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0858 |
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| Symbol | pdc |
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| ID | 3514858 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter arcticus 273-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007204 |
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| Strand | + |
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| Start bp | 1025921 |
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| End bp | 1027591 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637669546 |
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| Product | putative pyruvate decarboxylase |
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| Protein accession | YP_264145 |
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| Protein GI | 71065418 |
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| COG category | [G] Carbohydrate transport and metabolism
[H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3961] Pyruvate decarboxylase and related thiamine pyrophosphate-requiring enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.434282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.563377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAC AATATACCAT CGCTGATTAT TTGTTTGATC GTATCGCAGA AGCGGGTGCA
TCAGAGGTAT TTGGCGTACC TGGTGATTTT AACTTAACTT TTTTAGACAA TATTATCGCC
TCTGATAAGC TGCGCTGGGT GGGCAATACC AATGAGTTAA ATGCAGGTTA CGCAGCTGAT
GGCTATGCAC GTGAGCGTGG GTTTGCGGCG ATGGTGACGA CCTTTGGAGT CGGGGAGCTG
TCTGCTATCA ATGCCACGGC AGGCTCGTTT GCAGAGTATG CGCCAGTGCT TCATATCGTA
GGCGCGCCAA GTACAGCATT ACAAGATTCA AAGCGCCGCA TTCATCACTC ACTTGGTGAT
GGCGTGTTCA ATCATTTTAT CAAAATGGTA GAGCCGGTCA CGGTAGCACG GGCGCAAATT
ACGCCTGAAA ATGCCGCCTC AGAGATTGAC CGCGTGATTC GCTTGATTCT TAAAAAGCAT
CGCCCTGGTT ACTTAATGCT ATCGCCTGAT GTTGCGCGTC AACCTATTTA TCCACCGACG
ACCAAGCTCG TTGATAGCCA AGAAGATATT ACCAGTCAAG CAGCGCTGGC AGATTTTAAG
CAAGCACTAA TAGCGTTCTT ACCAAACAAA ACCACGACTC TCATGGCAGA TTTGATGGTG
CATCGTTTAG GGCTGCAAAA TCAGCTTAAG GCTTTGATTG CTGATACTGA TATTCCTTAT
ACGACGTTAT CGTGGGGCAA AACCTTACTC GATGAAAACA GCGATCGTTG GGCAGGGACT
TATGCGGGCG TTGCATCGCG CCCTGTGGTC AAAGATGCGG TCGAGAACTG TGAGTGTCTG
ATAAAAATCG GTGTGCAATA TACTGACACC ACCACCGCAG GATTTAGTCA AGATATCGAT
GAAAATGTCG TGGTTGATTT GCATTATGAA CGTGCTAGTA TTGCTGGCAA AAACTTTGCG
CCCATTGCCC TAAAAGATGC CCTAAAAACA CTGCATGAGG TGATGACTTC AGACATTAAT
ATTGTGCCGA AGCAGTTCTA TAAAGAGGTG AAGCCGCATG AGCAACATGG CAAGGATAAT
GAGGCTATCC GTCAAGATGA CCTCTGGCAT ATCATTGCCG ATCATCTAGA TCATAATAAC
TTGGTGTTTG CAGAACAGGG AACGGCATAT TTTGGTATCA GTGATGTACG TCTACCAGAA
GGCGTGACTT GTTATGGACA ACCAATGTGG GGGTCCATTG GTTATACTTT ACCGGCAAGT
TTGGGTGCAG CGATTGCATC ACCAAGCAAG CGCAGTGTCT TGTTGATTGG TGATGGCTCA
GCGTTATTAA CTATCCAAGA GATTGCAGTG ATGATTCAAG AACGGATCAA TCCAGTGATT
GTGCTGATTA ATAATGACGG CTATACCGTT GAGCGAGCGA TTCATGGTGA GAACCAGCGC
TATAATGACA TTCCTAAATG TGATTGGCAA GCGATGCCAA AAGCCTTTGG TGCGACAGAA
GAAAACAGTC TAATGCTTAA GGTAGCAACA GCGGGTGAGC TAAAAGCGTC CCTCGAAAAA
GCCGCTGCTA CTACGGACAA GTTGGTCATG CTAGAGGTAA TAGCGGCTAA GCATGATATC
CCGCCACTAC TAGCTGATAT CAGCGCTGCG CTTAAGCCAA AAGCTGATTA A
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| Protein sequence | MSQQYTIADY LFDRIAEAGA SEVFGVPGDF NLTFLDNIIA SDKLRWVGNT NELNAGYAAD
GYARERGFAA MVTTFGVGEL SAINATAGSF AEYAPVLHIV GAPSTALQDS KRRIHHSLGD
GVFNHFIKMV EPVTVARAQI TPENAASEID RVIRLILKKH RPGYLMLSPD VARQPIYPPT
TKLVDSQEDI TSQAALADFK QALIAFLPNK TTTLMADLMV HRLGLQNQLK ALIADTDIPY
TTLSWGKTLL DENSDRWAGT YAGVASRPVV KDAVENCECL IKIGVQYTDT TTAGFSQDID
ENVVVDLHYE RASIAGKNFA PIALKDALKT LHEVMTSDIN IVPKQFYKEV KPHEQHGKDN
EAIRQDDLWH IIADHLDHNN LVFAEQGTAY FGISDVRLPE GVTCYGQPMW GSIGYTLPAS
LGAAIASPSK RSVLLIGDGS ALLTIQEIAV MIQERINPVI VLINNDGYTV ERAIHGENQR
YNDIPKCDWQ AMPKAFGATE ENSLMLKVAT AGELKASLEK AAATTDKLVM LEVIAAKHDI
PPLLADISAA LKPKAD
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