| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyc_0461 |
|---|
| Symbol | |
|---|
| ID | 3514606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter arcticus 273-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007204 |
|---|
| Strand | - |
|---|
| Start bp | 568652 |
|---|
| End bp | 569905 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637669147 |
|---|
| Product | major phage capsid subunit precursor |
|---|
| Protein accession | YP_263758 |
|---|
| Protein GI | 71065031 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.561977 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTGATA TCAAGAAAAC AGCCTTAGTC TGTGCCATTG CTAGCATGGG TGTAGTGACC
CGTGATGCTG GCGGCTCTAA AGATGAATAT GAAAAGCTTG CTGGTCAGCT AAAAACTCGC
TTAACAACGC TCGATAAGCT CATCGAAGAT AAGCAAAAGC TACTTACCGA CGATAAAGCA
GACACTGAAA GCCGTAACGC TGCTATTAAA GATTTGCAGG ATAGCGTCAA AGACGTCGGT
GAATTGTCTG CCCGCTTTGA AGAGCTTGAA CAAAAAATGG TGCGCGGTGT ACAAGACGGC
GATCTTGACC CTAATAGTAT CGGTGGCCTA CTCTCTCGCA ACGAAGGCAT CTCGCAAGAA
ATCAAAGCGA TTAAGCATTC ACGCGGCAAA GTACAGATTG ATGGCGTCTC TGCGCGTAAT
ACGGTACTGC TAGGCACAAT CAACACGGCT GGCAATATCA ACGATGCTAA GATGGTCGCC
GCGACTGAAG ATCCTCTGAC CATCGTCACT ATGATCAATT GGATACCAAC GACTGCACCG
CTTATCCCTT ATGTGCGTGA AAGCGCTGTC ACATTTATGG CTGACATCGT GCCAGAAGGT
ATGCTTAAGC CTGAGTCAAG CCTTACGTTT GGCGTTGACT CGCTAGAGAT TGACGTTATT
GCGCATTGGA TACAAGTCAG TAATCAGGTG TTAGATGACG CTCCAGCACT AGCTGCTTAT
ATCGAAGGTC GTATGGCTTA CGGTGTGCGC TTGAAACTTG AATATCTGGT CATCAATGGC
GATACCAAAA GTTTCAAAGG TCTGATGAAA GTTGGTAATA GCTTAACTAT TGTGTCAAAC
GACAATGCAA TTGACACGAT TAGCACCGCA AAAGCCAAAG CTTACGCTAA CTTTTTGCCT
CCTGAGACCG TTATCTTAAA TCCGCAAGAC TGGGCTGGAA TCGAACAAGT CAAAGGTACT
GACGGCCATT ATATCTTTGG TTCACCAGGC GCAGCGGTTC AGCCCGTACT TTGGGGCTTG
AAAGTTATGC AGTCACCAGC AATGGCAATT GGTAAGTTTT GGGCTGGTAA TATTACTATG
GCGACTGAAG GCTATATCCG CCAAGATGTC ACTGTTGAGC TGTCTACTGA AGATAGCGAC
AACTTCCGCA AAAACTTGGT AACTATTCGT GCTGAGATGC GAGCTGCCTT TGGTGTGGTC
ATGCCTGATG CTGCTGTGAC GGGTGACCTC GTTAACGTAG GCCCCGTAGT CTAA
|
|---|
| Protein sequence | MRDIKKTALV CAIASMGVVT RDAGGSKDEY EKLAGQLKTR LTTLDKLIED KQKLLTDDKA
DTESRNAAIK DLQDSVKDVG ELSARFEELE QKMVRGVQDG DLDPNSIGGL LSRNEGISQE
IKAIKHSRGK VQIDGVSARN TVLLGTINTA GNINDAKMVA ATEDPLTIVT MINWIPTTAP
LIPYVRESAV TFMADIVPEG MLKPESSLTF GVDSLEIDVI AHWIQVSNQV LDDAPALAAY
IEGRMAYGVR LKLEYLVING DTKSFKGLMK VGNSLTIVSN DNAIDTISTA KAKAYANFLP
PETVILNPQD WAGIEQVKGT DGHYIFGSPG AAVQPVLWGL KVMQSPAMAI GKFWAGNITM
ATEGYIRQDV TVELSTEDSD NFRKNLVTIR AEMRAAFGVV MPDAAVTGDL VNVGPVV
|
|---|
| |