Gene Psyc_0227 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyc_0227 
Symbol 
ID3514707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter arcticus 273-4 
KingdomBacteria 
Replicon accessionNC_007204 
Strand
Start bp268184 
End bp269728 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content44% 
IMG OID637668914 
Producthypothetical protein 
Protein accessionYP_263534 
Protein GI71064807 
COG category[V] Defense mechanisms 
COG ID[COG4268] McrBC 5-methylcytosine restriction system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0395217 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAACA ATGGACGCAA TCAGAGCGCT GCAAAACATA AGATAAAAAG CGCTCATATG 
AGTATGCCTG ACAGCAATCT TACCGCTCAT ATCATGACAG TGTTCGAGCA TCAGCGCTTA
ATAATGCATG ATTTTTCATA CATTTCTGAT TTTCAGTGGT TGATAGCGCA AGAGCTGTCA
GTTTTTAGCA TTAAGCGTAA GCAAGGACAG TGGCAACTAA AGGTTGGACA TTATATCGGC
GTCATTGTCA TGCCTAGCGG TATGATCCTT GAGATACTGC CAAAACTTAT CGGAAACACT
GCTAGTAGCC CTACTCAGCA GTCATGCCAG CCAAATAAGC CGCTAGCAGA TACAGATATT
TTTCAAACCC GTCACTGGGT ACAAAATATG CTGTCAGACT TAATGAATAG TGATGATGAC
AAATCGCCTC ATAGCAAAAA TTTTGGGCAA TTCAGCAGCC CGTTGATAGC GCTGCCAGTA
GCCGCATTGC CTTTATCTGA TTGGCTCATT ACTCAGTTTT TGCAACGCTT AGCGCATCAT
CAGCCGATCA CGCATTATCA AACCCAAATC CATAACCAAA CAGCGTTACA AGGTCGCCTG
CTGATAAAAG AACAGCTGCG CCACAATAGT ATGCAGCCTC ATAAATTCGT CTGTGAGCGC
AGTGTGCTGA GTAAAGGCAT GCTGGCTAAT CGAATCATTA AAAGTGCATT AAAGCTGCTT
GCCCCTCTGC TATCCCAATC AAACCTTCTT CTATATTTGC AGCCGTGGCA GCAAGTCTCT
GTTCTACATC AGTATGAAAT ACGCCAGCTA GCGTCAATAT ATTTTCAAGC GAAGCATGAG
CTTGCGATTC AGCCACTGCA AGCGCAGCAA TTACAAGCCG CCCAGCAGCT AGTAGATTTT
GCTTATTGGC TGCTATGCCA GTCACATGCT GAGACTGGTC ACAGTATCGA TTCACAAAAC
CCATTTCATA AAAAATTAAC GCCGCAGCGC TTATGCCTAT TGATTGATAT GAATCAAGCG
TTTGAACAAT GGGCGAGTCA GCGTATCGCG CTATTTTTCC AGCAGTTAAG CGACGACTAT
AAACCACTGT TTCAAACGCA GCGTGTCTGG CTCAATGATG CAGAAGGGCA GGCGTGTTTG
TCTATTCGTC CTGATTTACT GATTTATAAG CAGATACATT CAAGTGCTGA AAATACCGCC
ATGTATGATA ATTATGTCTC ACAAGCAAAG GATGCGCGAG AAAAGCATTC ACGTCACTAT
AGCCATGTGA TCGATATTAA ATGGAAGCAT TTAGCGCATG CCAGCGCTAT TAGTGCCAGC
GACGCCTATC AATTGAGCAG CTATGCGCAG GCTTATCAAG CAGAGCAAGT CTGGCTGGTA
TATCCGGTAC AAGACGATCA GAGACAAGCG GTTGTATTGA AGCAAGACAC TCAGGACACA
TATAATAGTG AAAACGCATC CTATGCTCAG TTATGGCTGA TACCCTTTAA TGTGCTGACA
GCTACGATAA ACACTGACTT GCTTCCGACA CAAGATGTAG TATAA
 
Protein sequence
MNNNGRNQSA AKHKIKSAHM SMPDSNLTAH IMTVFEHQRL IMHDFSYISD FQWLIAQELS 
VFSIKRKQGQ WQLKVGHYIG VIVMPSGMIL EILPKLIGNT ASSPTQQSCQ PNKPLADTDI
FQTRHWVQNM LSDLMNSDDD KSPHSKNFGQ FSSPLIALPV AALPLSDWLI TQFLQRLAHH
QPITHYQTQI HNQTALQGRL LIKEQLRHNS MQPHKFVCER SVLSKGMLAN RIIKSALKLL
APLLSQSNLL LYLQPWQQVS VLHQYEIRQL ASIYFQAKHE LAIQPLQAQQ LQAAQQLVDF
AYWLLCQSHA ETGHSIDSQN PFHKKLTPQR LCLLIDMNQA FEQWASQRIA LFFQQLSDDY
KPLFQTQRVW LNDAEGQACL SIRPDLLIYK QIHSSAENTA MYDNYVSQAK DAREKHSRHY
SHVIDIKWKH LAHASAISAS DAYQLSSYAQ AYQAEQVWLV YPVQDDQRQA VVLKQDTQDT
YNSENASYAQ LWLIPFNVLT ATINTDLLPT QDVV