| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_5004 |
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| Symbol | |
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| ID | 3370556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5934465 |
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| End bp | 5936483 |
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| Gene Length | 2019 bp |
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| Protein Length | 672 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637655373 |
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| Product | chemotaxis sensory transducer |
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| Protein accession | YP_238069 |
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| Protein GI | 66048228 |
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| COG category | [N] Cell motility
[S] Function unknown
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG3287] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.71371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTTT TATCTCGTTT TCGGGCCGGC ACGTCGCGGA CCGAGGGCGC CATCAGTGTC
ATTACGTCCG CCCGAGAATT GAACGCCAAG CTGTCTGCGC TGAGCTTCGA TCCGGTCTAT
CTGACCGGTT TCGTTTCGCC GCACGTCGAC TTCGATCAGG TGGCCAAGTC TGTCGCTGCG
CGCTTTCCCA ACGCGAAGAT CAGCCTGTGC ACAACGTCAG GCGAACTGTG CTCGGGCAAT
GATTCGCTGT ACTGCGCGGC GGATAACCAG TGGGACAGGA TTGTCCTTGC GCTGTTCGAC
TCAAGCGTCA TCAAGAGTGC GGAGGTGTTA CACATTCCGC TGCACAGCGA AGACATTCGC
GGCGCGGGCA AGCGACTGTC GATGCGTGAG CGCATTGCGC GCCTGACCGA CTCGATCAAG
CGCACGCAGA TCAACACCCC CATCGACCAC CGCGATACGC TGGCCTACGT CACGTTCGAC
GGGCTGTCGG CGTCGGAGTC GTTCTTCATG GAAGCGCTGT ATGAGTCCGG GCGCTTTCCG
TGCCTGTTCG TCGGCGGTTC TGCGGGGGGC AAAGGCGACT TCAAGAAGAC CTTGATTCAC
GACGGCAAAC GCAGCTACGA AAATCATGCC CAGGTGGTGT TTCTCAAGAG CGCAAAAAAC
GTGCGCTTCG GCGTCTTCAA GAGCCAGAAC TTCGAGCCGA CGCCACTGAG CCTGAGTGTG
CTGACGGCCT CCCTGGAGGA GCGTTACATC AGCCAGGTGG TCAACGCCAG AGGCGAGATC
ACCACGATGG TTGCGGCGCT GTGTGAGGCG CTGAAGTGCG AGCGGCATGA GCTCGAAGGC
AAGCTGGCGC AGTACTCGTT CGCCATCCGG GTGGGCGAAG AGCTGTTCGT GCGCTCGATT
GCGCGCATTG ATTATGAAAG CGAACGGGTT CACCTGTTCT GCGACGTGGC GCCCGGCGAA
GAGCTGGTGA TGGTCAAACG AACATCCATG ATCGACACCA CGCGCAAAGA CTTCGCGCGC
TTTCTGCAGG GCAAGTCCGG AAAGCCGCTG CTCGGCCTGT TGAGCGACTG CATCCTGCGG
CGCCTGAACA ACGGCAGTGA ACTGGGCCGG ATGAATGACG TGTTCGGTGC AACGCCGGTG
GTGGGCTTTT CGACCTTTGG CGAGATTCTG GGGTTGAACC TCAACCAGAC GCTCACTGCC
GTGTTCTTCT TCAAAGTGCC CGAAGGCCAG CCGTTCCGCG ACGACTACAT CGATAACTTC
ATCGCCTATT ACGGCGAGTT CAAGGCGTTC TTTCTGCGTC GGCAGATCAA GAAGCTGGCT
GGTCTGAGCC ATGTGGTGGT CAAGCAGATC GATCAGTTCA AGCAGCGCAA CTTCGTGCAA
ACCATTGACC CGAGCGGTCT GGACGAGCAG ATCCGTCCGG TGTTCGGTGG CCTGAGCGAC
CTCGGCGATG TGCTGGTCAA GGCCCACCAT GATCAGGAAG AAATCGCCGC TCAGTTGCGT
CACTACTCTG GCGAGCTGCA TGTGTCGATG GACGAGCTGT CGCAGACCAT CACCCAGCAG
GAAACGGTTA TCGACAAAGC GGGCAGCACT GTCAAAAGCC TGGTCAGTCA GGCTGACGAG
GTGGTGCTGG GCTCGCGGGA GCTGGCCAAG TCCAGCCTGC GCATTCAGTC GGTGGTGCAG
ACGATCCAGC AGATCGCCGG ACAGACCAAC CTGCTGGCGC TGAACGCCGC CATCGAGGCT
GCACGGGCGG GCGAAATGGG ACGTGGCTTT GCCGTGGTGG CCGATGAAGT GCGCCAGCTG
GCGCAGAAGA CGTCGCAGAA CGCCAACGAC ATCGGCACCG ATATCGAGCG CCTGGCCGAA
GAGATTCGCA AAGTGGCGCA GCACATCGAG GAGCAGTCCC TTGAGGTCGG AACGCTGACG
GGGCTGCTGT CGGAACTGGA AGGCTCCAGC GACATGACGG CGGGCACCTC GCAGCGTACC
CGGCAACTGG CGGATACCCT GCGCGGGCTG ACTCAGTAG
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| Protein sequence | MSLLSRFRAG TSRTEGAISV ITSARELNAK LSALSFDPVY LTGFVSPHVD FDQVAKSVAA
RFPNAKISLC TTSGELCSGN DSLYCAADNQ WDRIVLALFD SSVIKSAEVL HIPLHSEDIR
GAGKRLSMRE RIARLTDSIK RTQINTPIDH RDTLAYVTFD GLSASESFFM EALYESGRFP
CLFVGGSAGG KGDFKKTLIH DGKRSYENHA QVVFLKSAKN VRFGVFKSQN FEPTPLSLSV
LTASLEERYI SQVVNARGEI TTMVAALCEA LKCERHELEG KLAQYSFAIR VGEELFVRSI
ARIDYESERV HLFCDVAPGE ELVMVKRTSM IDTTRKDFAR FLQGKSGKPL LGLLSDCILR
RLNNGSELGR MNDVFGATPV VGFSTFGEIL GLNLNQTLTA VFFFKVPEGQ PFRDDYIDNF
IAYYGEFKAF FLRRQIKKLA GLSHVVVKQI DQFKQRNFVQ TIDPSGLDEQ IRPVFGGLSD
LGDVLVKAHH DQEEIAAQLR HYSGELHVSM DELSQTITQQ ETVIDKAGST VKSLVSQADE
VVLGSRELAK SSLRIQSVVQ TIQQIAGQTN LLALNAAIEA ARAGEMGRGF AVVADEVRQL
AQKTSQNAND IGTDIERLAE EIRKVAQHIE EQSLEVGTLT GLLSELEGSS DMTAGTSQRT
RQLADTLRGL TQ
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