| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_4988 |
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| Symbol | |
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| ID | 3370540 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 5916253 |
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| End bp | 5917695 |
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| Gene Length | 1443 bp |
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| Protein Length | 480 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 637655357 |
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| Product | YD repeat-containing protein |
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| Protein accession | YP_238053 |
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| Protein GI | 66048212 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3209] Rhs family protein |
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| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTTG TTGTAGGCCA GCTGATCAGC GACATGGAGC GCGACGACCT GCACCGCGAG
GTCTACCGCA CCCAAGGCAA GCTGACCAGT TGCTTCGGCT ATGACAGCAT GGGTCGCAAG
GCCTGGCAGT ATGCAACCAC CCTGCCCGCG GAAAAGCTCT CGCAGATCCA GAACCCGCTC
ATAAAGCCAG AGCGCTACGT CGAACACGCC TACAACCCGA TTCACCGCCG TTATGAATAC
GACCCGGCCG GTGAACTGAG CCGCACCCTC GACAAACTGC GCGGCGAAAC CCAGTACGAA
TACGAAGCCA ACGGCCAGCT GCTGGCGCGC AACACCGGTC GCGTGGTCGA TGGCGAAGAG
TTCCGCTACG ACGCTGCGGC CAACCGCCTC AACTTCAACA CCAGCCGATT CGATCACGTC
AAAGACAACC GCCTCAGACA ATGGGCGAAC CACGAATACA AATACGACGC CTGGGGCAAC
CTGATAGAGA AAACGGTCGG CATCGTACGC TGGCAGACCT TCACCTACGA CTGTGAAAAC
CGCCTGGTCA AAACCGAGAC CATGGCTGAC ACGCAGGTGG AAAGCACCAG TAGCTACCAA
TACGATAGTT TGGGCAGGCG AGTCGCCAAA CAGTCCGAGA TCAAAGGCCA TACCGGCCAA
AAACGCTTCC TCTGGCAAGG CCTGCGGATG CTGCGTGAGG AAAGTCCGGG CCAGAGCAGC
CTGTACCTCT ACGAGCCCGG CAGCTATGCG CCGCTGGCCC GTGTGGATGA AAAAGAAGGC
GAGGTAGAGA ACAAGGTTTA CTACTTCCAC ACCGACCAGA TCGGTACGCC GCTGGAGATG
ACCGACGCCG AAGGGCAGAT CGTCTGGCAG GCCAAATACC GGGCGTGGGG CGCGGTGGAA
AAGGTGGTGG TGAACGAGGT TGAGCAGAAC CTGCGGTTTC AGGGGCAGTA TTTTGATGTC
GAGACGGGGC TGCATTACAA CACGTTTCGG TATTATGACC CGGAGATTGG GCGGTTTATT
ACGCAGGATC CGATTGGGTT GTTGGGTGGG GAAAATCTTT ACAAATATGT ACCAAACCCA
ACAACATGGG TAGATCCATG GGGATGGGAA TGTTGGAGCA CGGCTCGTAA AAACTACTGG
AAAGCCGAAG CAAAGAATCC AACTCAAACA TACTCACCAG CTAACATGGC GCGAATGACA
AAAGGTCAAG CGCCGAGAAT GAAGGTTGAG GTTATAAATA GAAAAACCGG CAAACCTGAA
ATTAAAGACG TTTCTATGGA ACTGCATCAT AGAGATATAC CTCAGCGAGT CGGAGGGGAC
GGAGTACATC AGGCAGGAAA TCTTGATGCT TTAACTCCAT GGGCCCACGA GTCAGTCGCA
TTTAGGCATA CGGGATATAG GTTCGTAGAT ATGATTAAGG GGCTAGACAC ATGGGTCAAA
TGA
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| Protein sequence | MSLVVGQLIS DMERDDLHRE VYRTQGKLTS CFGYDSMGRK AWQYATTLPA EKLSQIQNPL
IKPERYVEHA YNPIHRRYEY DPAGELSRTL DKLRGETQYE YEANGQLLAR NTGRVVDGEE
FRYDAAANRL NFNTSRFDHV KDNRLRQWAN HEYKYDAWGN LIEKTVGIVR WQTFTYDCEN
RLVKTETMAD TQVESTSSYQ YDSLGRRVAK QSEIKGHTGQ KRFLWQGLRM LREESPGQSS
LYLYEPGSYA PLARVDEKEG EVENKVYYFH TDQIGTPLEM TDAEGQIVWQ AKYRAWGAVE
KVVVNEVEQN LRFQGQYFDV ETGLHYNTFR YYDPEIGRFI TQDPIGLLGG ENLYKYVPNP
TTWVDPWGWE CWSTARKNYW KAEAKNPTQT YSPANMARMT KGQAPRMKVE VINRKTGKPE
IKDVSMELHH RDIPQRVGGD GVHQAGNLDA LTPWAHESVA FRHTGYRFVD MIKGLDTWVK
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