Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_3977 |
Symbol | |
ID | 3369512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 4724093 |
End bp | 4728559 |
Gene Length | 4467 bp |
Protein Length | 1488 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637654334 |
Product | Urea amidolyase-related protein |
Protein accession | YP_237045 |
Protein GI | 66047204 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [I] Lipid transport and metabolism |
COG ID | [COG1038] Pyruvate carboxylase [COG1984] Allophanate hydrolase subunit 2 [COG2049] Allophanate hydrolase subunit 1 [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain [TIGR02712] urea carboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACA AACTGCTGAT CGCCAACCGT GGCGCCATTG CCTGCCGCAT CCTGCGGACC CTGCGCACCT TGCAGGTCAA GGGCGTGGCG GTGTATTCCG AAGCCGACGC TGCCAGCCTG CACCTGATGC AGGCCGACGA AGCCCACAGC CTGGGCGAAG GTGGCGCAGC CGGAACCTAT CTGGCGGTGG ACAAGATCCT CGCCATCGCC AACGCCAGCG GCACCAAAGC CATTCATCCC GGCTACGGTT TTCTCTCCGA AAACGCTGCA TTCGCTCAGG CCTGCGAAGA CGCCGGTATC GCCTTCGTCG GCCCGACGCC CGAGCAACTG CGCGTATTCG GCCTCAAGCA CACCGCCCGA GCGTTGGCCA AGCAGCATGG CGTGCCCATG CTCGAGGGTA CTGAACTGCT CGACAGTCTG GAGTCGGCCA TCGCGGCAGC CCGCACCATC GGCTACCCGG TGATGCTCAA GAGCACGGCA GGCGGTGGCG GCATCGGCAT GCGTGTGTGT CGCAGTGCCG GAGAGCTGGC TGACTCGTTC GAGGCGGTCA AGCGCCTCGG TCAGAACAAT TTCAGCGATG CGGGTGTGTT CATCGAGAAA TACATCCAGC GCGCCCGCCA CCTGGAAGTG CAGGTGTTCG GCGACGGTCA GGGCGAGGTG CTGGCGCTTG GCGTACGCGA CTGCTCGGTG CAGCGGCGCA ATCAGAAAGT GCTGGAAGAA ACCCCGGCCC CGAACCTGCC GCACGGCATG GCCGAAGAAC TCTGCGCAGC GGCTGTCAAA CTCGCCAGGG CAGTCAATTA TCGCAGCGCC GGGACGGTCG AGTTCGTCTT CGACAGTGAA GATCAGCGCT TCTATTTTCT GGAAGTGAAC ACACGCTTGC AGGTCGAGCA CGGCGTCACC GAGCAGGTCT GGGGCGTGGA TCTGGTCAGC TGGATGGTGC AACTGGCCGC CGGTGATCTG CCGCCGCTGG ATCAGTTGCA GGCCGGTCTG AAACCGCTTG GTCATGCGAT TCAGGCGCGG CTGTACGCGG AAGATCCGGG CCGTGACTTC CAGCCCTGCC CTGGCCTGCT GACTGCGGCT GATTTCCCGC CTGCCGATGG CCGGACGCTG CGCATCGACA CCTGGGTCGA AGCCGGTTGC GAGATACCGC CGTACTTCGA CCCGATGATC GCCAAGCTGA TCAGTTGGGC ACCGACCCGC GAGGACGCCA GCGCCGGGCT GATCGACGCG CTGAACGAAA CGCGTCTGTA CGGTGTGGAA ACCAATCGCG ACTACTTGCG CCAGATCATT GCCGACGCGC CGTTCGCCAG TGGCCAGCCA TGGACCCGCT GTCTGGAAGA TCTGGTGTAT CGCGCTGACA CCTTCGAAGT GCTGAGCGGC GGCACTCAGA CCAGCGTTCA GGATTACCCG GGACGACTGG GCTACTGGGC GGTCGGTGTA CCGCCATCCG GGCCGATGGA CAGCCGCGCG TTGCGCCAAG GCAATGAGCT GCTGGGCAAC CCCGAAGGAT GCGCTGCGCT GGAAATCACT ATGAGCGGGC CGCTACTGCG TTTCAACACC GATGCGGTGG TCGCAGTGAC CGGTGCGCAC ATCCCGATCA CCCTCGATGG CCAATCCTGT GCGATGAACA CCGCGCTATT GGTGAGCGCC GGTTCGACGT TGTCGCTGGG CACCATCGCA GGTGCCGGTG TACGCAGCTA CCTGTGCGTG CGCGGCGGGC TCGACGTGCC GGATTATCTG GGCAGCAAAA GTACCTTTAC CCTCGGCCAG TTCGGCGGTC ATGGCGGTCG CGCGCTGCGC GCCGGCGATG TGCTGCACAT CGCGCCCCTG GTGGATCGCC GTGCAGGGCA GCGGATTGCC GACGAGGCAC TTGAAGCGCT GACAGACGTG CGCCGGATGA GGGTCATTTA CGGCCCGCAT GCGGCCCCGG AATACTTCAC CGAAGCGTAC ATCGAGAGGT TTTTCGCGAC CGACTGGGAA GTGCATTTCA ACTCCAGCCG CACCGGCGTG CGCCTGATCG GCCCAAAACC CGAATGGGTG CGCGCCGACG GTGGCGAGGC GGGGTTGCAC CCTTCCAACA TTCACGACAA CCCGTATGCG ATCGGCGCGG TGGATTTCAC CGGTGACATG CCGGTAATCC TCGGGCCGGA CGGACCCAGC CTGGGCGGAT TCGTCTGCCC GGTGACCATC ATCGAGGCAG ACCTGTGGCA GCTGGGGCAA TTGAAAGCTG GCGACAGGGT CCGATTCACC CCTGTCAGTG TCGAGGCGTG TCATGCAGAA CGATGTGGGA GCGAGCTTGC TCGCGAAGAC AGTATTCCTG ACGCAGAAAA TCCATCGACT GTGCCGCCCT CTTCGCGAGC AAGCTCGCTC CCACAAGGCA CCGCAAACTC CAGTAGGAAC GAACTTGTTC GCGAAGGCAG TATTCCTGAC GCAGCAAATC CATCGACTGC AACGCCCTCT TCGCGAGCAA GCTCGCTCCC ACAAGGCACC GCGCGCCTTC AAGGCATCGC AAACTCCCGT AGGAGCGAAC TTGTTCGCGA AAACAGTATT CCTGACGCAG AAACCCCATC GACTGTGCCG ACTTCTTCGC GAGCAAGCCA GCTTCCACAA GGCCCGGCAA ACTCCCGTGG GAGCAAGCTT GCTCGCGAAA GCTATATGCC TGACGCAGAA AATCCATCGA CTGCAACGCC CTCTTCGCGA GCAAGCTCGC TCCCACAAGG CCCCGCAAAC GCCCGTAGGA GCGAACTTGT TCGCGAAAAC AGTATGCCTG ACGCAGAAAA TCCATTGACT GCACCGCCAT CTTCGCGAGC AAGCTCGCTC CCACAAGACT CCGCGAACTC CCGTAGGAGC GAGCTTGCTC GCGAAGGCTA TATGCCTGAC GCAGAAAATC CATTGACTAC ACCTCCCTCT TCGCGAGCAA GCCAGCTTCC ACAAGGCCCG GCAAACTCCC GTGGGAGCGA GCTTGCTCGC GAAGGCTATA TTCCTGACGC AGAAAATCCA TTGACTGCAC CGCCATCTTC GCGAGCAAGC TCGCTCCCAC AAGGCACCGC GCGCCTTCAA GGCATCGCAA ACTCCCGTAG GAGCGAACTT GTTCGCGAAG GCAGTATTCC TGACGCGGAA AATCCATCGA CTGCAACGCC CTCTTCGCGA GCAAGCTCGC TCCCACAAGG CCCCGCAAAC TCCAGTAGGA GCGAAGTTGT TCGCGTAGAG GATCTGCGCA CTCCGGTCAT CCTCGACATC GGCCAGGACG ATAAACGCCT GGTCGCACGT CTGTCCGGCG ATACCCATCT GCTGCTGGAA ATCGGTGCGC CGGAGCTGGA TCTGGTGCTG CGCCTGCGTG GCCACGCACT GATGCTTGCG CTGGAGGCCA AGGCGCTGGC GGGTGTGATC GACCTGACGC CAGGCATTCG CTCGCTGCAA GTCCACTATC GCCCCGAGCA GCTGCCGCTT CGGCAACTGC TCGACATCGT CGCCGGAGAA TGGGACGCGG TGTGCGCCGC GAAAGACCTG CAAGTGGCGT CGCGCATCGT CCATCTGCCA CTGTCCTGGG ACGACCCGGC CTGCCAGCTG GCCATCGAAA AATACATGAC CACCGTGCGC AAGGACGCAC CGTGGTGCCC AAGCAACCTG GAGTTCATCC GCCGTATCAA TGACCTGCCC AACCTCGACG AAGTGCAACG TACGGTGTTC GACGCCAGTT ATCTGGTCAT GGGCCTGGGC GATGTGTACC TCGGCGCACC GGTGGCCACG CCGCTGGACC CGCGCCACCG GCTGGTCACC ACCAAGTACA ACCCGGCACG CACCTGGACC GCCGAGAATT CGGTGGGCAT CGGCGGCGCC TACATGTGCG TGTATGGCAT GGAAGGCCCC GGCGGTTATC AGTTCGTTGG CCGCACGTTG CAGATGTGGA ATCGCTATCG CGACGTCGCC GCCTTCCAGG GCAAACCATG GCTGTTGCGC TTCTTCGATC AGATCCGTTT CTACCCGGTC AGCGCCGAAG AACTGGTGCG TATCCGCCGC GACTTCCCGC TGGGTCGCTT CGCCCTGAAC ATCGAACACA GCACCCTGAA TCTGGCTGAT TACCAGGCCT TCCTGAGCCG CGAAGCCGAA GGCATTACGG CATTCCGCGC CCAGCAAAAC GCCGCTTTCA ACGCCGAGCG CGAACGCTGG ATCGCCAACG GGCAGGCCGA TTTCCAGAGC GATGAAGGCG TGGCGCCGAA CACTGAAGAA CAGCCCCTGC AACCCGGCCA GCAAGGCGTC GACAGCCACA TCGCCGGCAA TCTCTGGCAA GTCCAGGTGC AACCGGGAGC GCGCGTGGAA GCAGGCGATG TGCTGGTGAT TCTGGAGTCC ATGAAAATGG AAATCCCCCT GCTCGCCCCG ATCGCCGGCG TGGTGCAGGA CGTCAGGGTG CAACCCGGCT CGGCAGTACG CGCAGGGCAA CGGGTGGTGG TGCTGAGCGC AGACTGA
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Protein sequence | MFDKLLIANR GAIACRILRT LRTLQVKGVA VYSEADAASL HLMQADEAHS LGEGGAAGTY LAVDKILAIA NASGTKAIHP GYGFLSENAA FAQACEDAGI AFVGPTPEQL RVFGLKHTAR ALAKQHGVPM LEGTELLDSL ESAIAAARTI GYPVMLKSTA GGGGIGMRVC RSAGELADSF EAVKRLGQNN FSDAGVFIEK YIQRARHLEV QVFGDGQGEV LALGVRDCSV QRRNQKVLEE TPAPNLPHGM AEELCAAAVK LARAVNYRSA GTVEFVFDSE DQRFYFLEVN TRLQVEHGVT EQVWGVDLVS WMVQLAAGDL PPLDQLQAGL KPLGHAIQAR LYAEDPGRDF QPCPGLLTAA DFPPADGRTL RIDTWVEAGC EIPPYFDPMI AKLISWAPTR EDASAGLIDA LNETRLYGVE TNRDYLRQII ADAPFASGQP WTRCLEDLVY RADTFEVLSG GTQTSVQDYP GRLGYWAVGV PPSGPMDSRA LRQGNELLGN PEGCAALEIT MSGPLLRFNT DAVVAVTGAH IPITLDGQSC AMNTALLVSA GSTLSLGTIA GAGVRSYLCV RGGLDVPDYL GSKSTFTLGQ FGGHGGRALR AGDVLHIAPL VDRRAGQRIA DEALEALTDV RRMRVIYGPH AAPEYFTEAY IERFFATDWE VHFNSSRTGV RLIGPKPEWV RADGGEAGLH PSNIHDNPYA IGAVDFTGDM PVILGPDGPS LGGFVCPVTI IEADLWQLGQ LKAGDRVRFT PVSVEACHAE RCGSELARED SIPDAENPST VPPSSRASSL PQGTANSSRN ELVREGSIPD AANPSTATPS SRASSLPQGT ARLQGIANSR RSELVRENSI PDAETPSTVP TSSRASQLPQ GPANSRGSKL ARESYMPDAE NPSTATPSSR ASSLPQGPAN ARRSELVREN SMPDAENPLT APPSSRASSL PQDSANSRRS ELAREGYMPD AENPLTTPPS SRASQLPQGP ANSRGSELAR EGYIPDAENP LTAPPSSRAS SLPQGTARLQ GIANSRRSEL VREGSIPDAE NPSTATPSSR ASSLPQGPAN SSRSEVVRVE DLRTPVILDI GQDDKRLVAR LSGDTHLLLE IGAPELDLVL RLRGHALMLA LEAKALAGVI DLTPGIRSLQ VHYRPEQLPL RQLLDIVAGE WDAVCAAKDL QVASRIVHLP LSWDDPACQL AIEKYMTTVR KDAPWCPSNL EFIRRINDLP NLDEVQRTVF DASYLVMGLG DVYLGAPVAT PLDPRHRLVT TKYNPARTWT AENSVGIGGA YMCVYGMEGP GGYQFVGRTL QMWNRYRDVA AFQGKPWLLR FFDQIRFYPV SAEELVRIRR DFPLGRFALN IEHSTLNLAD YQAFLSREAE GITAFRAQQN AAFNAERERW IANGQADFQS DEGVAPNTEE QPLQPGQQGV DSHIAGNLWQ VQVQPGARVE AGDVLVILES MKMEIPLLAP IAGVVQDVRV QPGSAVRAGQ RVVVLSAD
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