| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_3406 |
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| Symbol | |
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| ID | 3368933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. syringae B728a |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007005 |
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| Strand | + |
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| Start bp | 4066069 |
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| End bp | 4067634 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637653757 |
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| Product | PAS |
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| Protein accession | YP_236476 |
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| Protein GI | 66046635 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein
[COG2202] FOG: PAS/PAC domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.387271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.671486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA ACCAACCCAT CACTCAACAT GAGCGGACAT TTCCTGCCGA ACAACGACTG
ATTTCCACCA CCGACACCCG AGGCACCATC ACCTATTGCA ATGATGCCTT CGTCGACATC
AGTGGTTACA GCGAGGCTGA ATTGCTGGGT GCGGCGCACA ACACCGTGCG TCATCCGGAT
GTACCGCCTG CGGTATTCGA GCACATGTGG ACCACGCTCA AGTCCGGGCA GCCGTGGATG
GGCATCGTCA AGAACCGCTG CAAGAACGGC GATCATTATT GGGTCAATGC CTACGTGACG
CCGGTGCTGG AAAACCGCCA GGTAGTGGGT TTCGAGTCGG TACGCATCAA GCCGACCGCC
GAACAGGTCC GCCGTGCCGA GGCGCTTTAT ACCCGGCTCA ACAAGGGCAA GAGCGCGGTA
CCAGGCCGCG ACAAGTGGCT GCCGGTACTT CAGGACTGGT TGCCGTTCAT TCTGGTCAGC
CAGCTGAGCT TTCTGATCGG GGTGTGGCTC AATTCACATT GGGGGTTTGC CCTGGCTGCG
GCATTGTCGG TACCGCTGGG CCTGCTGGGG CTTTCCTGGC AGCAGCGTGG CACCAAACGC
TTGTTGCGCC TGGCCGAACA GACCACGTCC GACCCGTTGA TCGCGCAGAT GTACACCGAC
AGCCGTGGGC CGCAAGCGCG CCTGGAAATG TCGATCCTCA GCCAGGAAGC GCGCATGAAA
ACCTGCCTGA CGCGTTTGCA GGACACGGCC GAACACCTGA ACAGTCAGGC CCGCCAGTCC
AACTCGCTGG CCAATGCCAG TTCGATCGGG CTGGAACGTC AGCGTGTGGA GACCGAGCAG
GTTGCCGCCG CCATCAACCA GATGGCCGCC ACCACTCAGG AAGTCGCCAG CCACGTTAAC
CGTGCCGCTG ATGCCACCCA GCAGGCCAAC GAACTGACGC GTCGCGGGCG CGATATCGCC
GGTGAAACCC GCGAAGCCAT TCAGCGCCTG TCCACCTCGG TGGGCGAAAC CGGCCTGACC
GTGACCCGCC TGGCCAAGGA CAGCGATGAA ATCGGTGGCG TGGTCGATGT GATCAAAGGC
ATTGCCGACC AGACCAACCT GCTGGCCCTC AACGCCGCGA TCGAAGCGGC GCGCGCCGGT
GAGATGGGTC GCGGCTTTGC CGTCGTGGCA GATGAAGTAC GCCAGCTGGC ACAACGCACC
GCCGAGTCCA CCGGGCAGAT TCATGGCCTG ATCGCCAAAC TGCAGCAGAC CGCAACCGAC
GCGGTACACA CCATGGACAC CGGTCGCCGT CAGGCCGAAG AAGGCGTAGC CCGGGTACTG
GAGGCAGATC AGGCGCTGGT GGGCATCAGC GAGGCTGTCG CCAATATTAC CGACATGACC
ACGCAAATCG CCACCGCCAC GGAAGAGCAA AGCGCCGTGG CCGAGGAAAT CAATCGCAAC
ATCGCCACCA TCGCCAGCCT GGCAGACCAG ACCTCTGACG AAGCGCGTCG CTCTGCCGTA
TTGAGTGGCG AACTGACCGA CACGGCCAAC TCACAGTATT CGCTGGTAGA GCGGTTTAAT
CGCTAA
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| Protein sequence | MRNNQPITQH ERTFPAEQRL ISTTDTRGTI TYCNDAFVDI SGYSEAELLG AAHNTVRHPD
VPPAVFEHMW TTLKSGQPWM GIVKNRCKNG DHYWVNAYVT PVLENRQVVG FESVRIKPTA
EQVRRAEALY TRLNKGKSAV PGRDKWLPVL QDWLPFILVS QLSFLIGVWL NSHWGFALAA
ALSVPLGLLG LSWQQRGTKR LLRLAEQTTS DPLIAQMYTD SRGPQARLEM SILSQEARMK
TCLTRLQDTA EHLNSQARQS NSLANASSIG LERQRVETEQ VAAAINQMAA TTQEVASHVN
RAADATQQAN ELTRRGRDIA GETREAIQRL STSVGETGLT VTRLAKDSDE IGGVVDVIKG
IADQTNLLAL NAAIEAARAG EMGRGFAVVA DEVRQLAQRT AESTGQIHGL IAKLQQTATD
AVHTMDTGRR QAEEGVARVL EADQALVGIS EAVANITDMT TQIATATEEQ SAVAEEINRN
IATIASLADQ TSDEARRSAV LSGELTDTAN SQYSLVERFN R
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