Gene Psyr_2832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_2832 
Symbol 
ID3368350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp3406247 
End bp3407281 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content57% 
IMG OID637653181 
ProductPhage integrase:Phage integrase, N-terminal SAM-like 
Protein accessionYP_235909 
Protein GI66046068 
COG category[L] Replication, recombination and repair 
COG ID[COG4973] Site-specific recombinase XerC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.206304 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.330128 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGGA AGCCGATTAA TCCCGACAGC GTCACACGCC TCAGAAAGCG TAAACAGCGC 
AGCGGGGTCG TCTATTACTA CTATGACATC GGAGGCTCAC CGCGAAAGGA AATCCCACTC
GGCTCGGACT ATGGCATGGC GATCGTCGAG TACGCCAAGC TGGAGAAGAG CCGAACATCC
TCGGCTCTCG TACAGCAGGT GCTGACCTTC GCGTATGTCG CGCAGAAGTA CATGATCGAG
GTCGTGCCGA CCAAAAGCCC GGCAACGCAG AAAGACAACG CCAGGGAGCT GAAGCAGCTT
CTGAAGTTCT TCGACGATCC GCCAGCACCG CTGGAAGCGA TCGAACCTCA ACACGTCGTG
CAGTACCTGC GCCAGCGCGG GAAGACTGCC CCTGTACGAG CAAACCGGGA GAAGGCGCTA
CTGAGTGCTA TCTGGAATTT TGCGAGGAGC GCCGGCTACA CAGCGCTGGC CAACCCATGC
GCGGGCGTAA AGGGTCACAA GGAAGTTGGG CGAGACCATT ACATCGAGGA CGAGATGTTT
GCTCTGGTTT ACGGCCATGC GGAGCAACCT CTACGCGATG CTCTGGATCT GTTCTACCTG
ACCGGACAGC GGATTGCGGA CACGCTGAAA ATGGACGAGC GCGATATACG CGACGGCCGG
CTATGGGTTC AGCAAGGTAA GACGAATGCA AAAAGGAGGA TTGAAATTAC AGGTGAGCTG
AAGGTGGTCA TTGACCGCAT TATGACCAGA AAGGAAGGAC ACAGGATCCG CACCTCCAGG
CTGATCGTCA TGGATAACGG CCAGCCCATG ACGAGCAGTA TGTTGCGGGG AAGATTTGAC
GCGGCACGCG AGGCGGCCGG TGTGGAGAAG GGAGAATTTC AGATGCGAGA CCTGCGAGCG
AAAGCCGGCA CGGATAAAGC TGAATCGAGC GGCGATATCC TTCAAGCCCG CGATCAGCTC
GGGCACACCA CCGTGGTGAT GACCGAGAAC TACATCCGCA AAAGGATCGG GAAAAAGGTC
ACTCCAACCA AGTGA
 
Protein sequence
MGRKPINPDS VTRLRKRKQR SGVVYYYYDI GGSPRKEIPL GSDYGMAIVE YAKLEKSRTS 
SALVQQVLTF AYVAQKYMIE VVPTKSPATQ KDNARELKQL LKFFDDPPAP LEAIEPQHVV
QYLRQRGKTA PVRANREKAL LSAIWNFARS AGYTALANPC AGVKGHKEVG RDHYIEDEMF
ALVYGHAEQP LRDALDLFYL TGQRIADTLK MDERDIRDGR LWVQQGKTNA KRRIEITGEL
KVVIDRIMTR KEGHRIRTSR LIVMDNGQPM TSSMLRGRFD AAREAAGVEK GEFQMRDLRA
KAGTDKAESS GDILQARDQL GHTTVVMTEN YIRKRIGKKV TPTK