| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1573 |
|---|
| Symbol | |
|---|
| ID | 3367073 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1768030 |
|---|
| End bp | 1768506 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637651914 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_234659 |
|---|
| Protein GI | 66044818 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.490025 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00990577 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAC CACTGTCCAA CCTGAACAAC GCCATACGCG ACATGCTGCT CGATTGCGGC
CTGTTCGACA CCCTGCTGCC GGGCGATTTC TTTACCGTAG CCGGCTATTT CAGCATTACC
GATATCGATA AAGGCGAGAC CATCTTTGCC GAGGGCGATG CCGGAACCTT CATGTGCATC
ATCCATCAGG GCACCGTGTC TGTGCAGAAG CTTGCCGCAG ACGGTCAACA GGTGGAAATC
GCCGTTCTGC GCCACGGCCG CGCCTTCGGA GAAATGGCGG TGCTCGATGG CGAGCGCCGC
TCGGCCAGTT GTATCGCAGC CACCAGTTGC CAGCTATTGA ACCTGGGCCG TGATTCGCTG
GACAAGATGC TCGAGGAAGC ACCGAAAATC GCCGCCAAGA TCATTCGTGC CCTGGCCATC
TCGTTGTCCA AGCGCCTGCG CATGGTCGAT GGTCAATTAC TCTCCCAACA GGTGTGA
|
|---|
| Protein sequence | MSEPLSNLNN AIRDMLLDCG LFDTLLPGDF FTVAGYFSIT DIDKGETIFA EGDAGTFMCI
IHQGTVSVQK LAADGQQVEI AVLRHGRAFG EMAVLDGERR SASCIAATSC QLLNLGRDSL
DKMLEEAPKI AAKIIRALAI SLSKRLRMVD GQLLSQQV
|
|---|
| |