| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Psyr_1435 |
|---|
| Symbol | |
|---|
| ID | 3366934 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. syringae B728a |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007005 |
|---|
| Strand | - |
|---|
| Start bp | 1623981 |
|---|
| End bp | 1624916 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637651778 |
|---|
| Product | regulatory protein, LysR:LysR, substrate-binding |
|---|
| Protein accession | YP_234524 |
|---|
| Protein GI | 66044683 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGAC TGGGCGACTT GAAACTGTTT GTGCGCACTG TAAAGCTTGG AAGTTTCTCC
AACGCGGCAC GCGAGGCTGA CCTTTTGCCG GGACAAGTCA GCGCTGCCAT AAAGCGTCTG
GAGCACGAAT TGGGTATCCG CTTGTTCGCC CGCTCTACCC GTAGTTTGCG TCTGACTGGA
GAGGGGGAAA CGTACCTCCC CAGCGCGATT ACCGCATTGG ACGCTCTGGC TCAGGGGCAG
GAGAGATTGC ACGGTGAAGG CAACCAATTG CAGGGGATAT TGCAGGTCGC CGCGCCATCT
GATCTAGGCA GAAACGTGTT GTTATCCTGC TTCAGCCAAT TTCGCAAAGA ACACCCACAG
CTTACTTTGC GCCTGCTGAT TTCTGATCGG CTGGCCAATG TTTTCCGTGA CCCAGTCGAC
ATCGCCATTC GTTATGGCAG CGCGGAAGAT GCCAGTTACG TAGAACGGCC TTTGGCCGCC
TGGAATCGAC GGGTGCTGGT TGCATCACCG GCTTACCTTT CCCGTCATGG TAGGCCGGCC
ATGCTGGAAG ATTTGAGTCA TCATTGCTGC CTTCTGTACA TGCTCAATGA GCACGTCTAT
GACAATTGGA AGATTGCGCA GCAGAAGATT CCTGTCAAAG GCCTATTGGT GAGTGACGAT
GCAGATGTCG TTAGACTTTG GGCGATTGCA GGCGAAGGGA TTGCGTACAA GTCCTGGCTT
GATGTCCGCG AGGATGTCCT TAGCGGTCGT CTGGAAATTT TGCTTGGACA GCATCCTGGG
GAATTGAGTC CGTTAAATCT GGTCTGTCCG CACCGCAAGC AATACTCGCC GGCAGTACGG
CAGTTGCACC AGATGCTTAG CCGCCATTTA GCGCCCTTCG CTGCGGATAT GGCCGCAGCG
TTGGCGAATG CCGAAATCCC TGACTCGACT GCGTAA
|
|---|
| Protein sequence | MMRLGDLKLF VRTVKLGSFS NAAREADLLP GQVSAAIKRL EHELGIRLFA RSTRSLRLTG
EGETYLPSAI TALDALAQGQ ERLHGEGNQL QGILQVAAPS DLGRNVLLSC FSQFRKEHPQ
LTLRLLISDR LANVFRDPVD IAIRYGSAED ASYVERPLAA WNRRVLVASP AYLSRHGRPA
MLEDLSHHCC LLYMLNEHVY DNWKIAQQKI PVKGLLVSDD ADVVRLWAIA GEGIAYKSWL
DVREDVLSGR LEILLGQHPG ELSPLNLVCP HRKQYSPAVR QLHQMLSRHL APFAADMAAA
LANAEIPDST A
|
|---|
| |