Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_1306 |
Symbol | |
ID | 3366801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | + |
Start bp | 1481894 |
End bp | 1482583 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637651645 |
Product | CheW-like protein |
Protein accession | YP_234395 |
Protein GI | 66044554 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00397528 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGGGCG TGTCCGGTTT TTCCAGTCTG ACCCATGATC AGGCCCTGGA TATCGATGAT TGCTGGAACC GCATCGGCAT TCATGGCGAT CGCTCCTGTC CGTTGCTTGC AGAGCACATC CACTGCCGCA ACTGCGCGGT TTATTCGGCC GCAGCCACCC GTCTGCTGGA CCGCTATTCG CTGGCCCAGG AGTCGCCCGA GCATTTTCAG GGCTCGGTGT TGCTGCGCGA CCTCGAGACC CGCTCGATTC TGGTATTTCG TCTTGGCGAA GAGTGGCTGG GGCTGGCGTC GCGCTGCCTC TCGGAAGTCG CCCCCAGCCA GACCATCCAT TCACTGCCAC ACCAGCGCTC GCGTGCGTTG CTGGGTGTCG CCAATGTACG CGGCGCTCTG GTAGCGTGCA TCTCGCTGGT CGAGCTGCTC GGGTTGGACA GTACCGCGGT GAGTAACCCG TCGACGCGGG TGGTACCGCG CATGCTGATC GTCAGCGTCG AAGGCGGCCC GGTGGTGGTC CCGGTGGACG AGGTGGACGG CATTCATGCC ATCGACGAGC GGGAGCTGGA AGCCGCTTCG GCGTCCGGCA CGCACGCCAA TGCCCGTTTC ACCCGTGGCG TCCTGCAATG GAAGGGCCGC AGCCTGCGCT GGCTGGATGA AGATGAGTTG TTGTCGGCGG TGTATCGGAG CCTCACATGA
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Protein sequence | MAGVSGFSSL THDQALDIDD CWNRIGIHGD RSCPLLAEHI HCRNCAVYSA AATRLLDRYS LAQESPEHFQ GSVLLRDLET RSILVFRLGE EWLGLASRCL SEVAPSQTIH SLPHQRSRAL LGVANVRGAL VACISLVELL GLDSTAVSNP STRVVPRMLI VSVEGGPVVV PVDEVDGIHA IDERELEAAS ASGTHANARF TRGVLQWKGR SLRWLDEDEL LSAVYRSLT
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