Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Psyr_0005 |
Symbol | |
ID | 3365480 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. syringae B728a |
Kingdom | Bacteria |
Replicon accession | NC_007005 |
Strand | - |
Start bp | 6282 |
End bp | 7169 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637650348 |
Product | hypothetical protein |
Protein accession | YP_233117 |
Protein GI | 66043276 |
COG category | [C] Energy production and conversion |
COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.489422 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAAGAC TCAATCTGGT TGCCCGTTCA GTGCTGGCCA GCTCTACCAT GCTGTGTTGG TCGACCGTGA CTCATGCCCT GGAAATCACC GCAGGCGATT ATGAGCCGCT GCCTGTCGGC ATGAACGCTT TGCTGGTTTA TGCACAACAC GCTGAAAGCT CGGACTTTTA CAGCAACGGT CAAAAAGTCT CGGACGATTT TCGGCTCAAG ACCGATGTCA GCCTGCTTCG CTATATCCAC TCGTTTGCGC TGAGCAACAA CGCGGTGATA GAGCCACAGT TCATCCTGCC TTATGGACAT CTGAAGGCTG GTGGTGAGGC AAGCGCGCTT GGCCAGACCA CCGGCGCCGG AGATCTGATT CTCGGCGCAC CGGTAAAGTG GACCTTAGCC ACTGCAAATA AGGATGTCTT TTCCGTGGCG CCTTACCTTT ATTTGCCTAC CGGCAGTTAC GAAAACGACG ACACACTCAA CCTGGGTGAA AACCGCTGGC GTCTTTTGCT GCAAGCAGCC TACATCCATC ACTTCAATGC CAGATGGGCT CTGGACACCG CTGCGGATGT CTCATGGTTC AGCGATAACG ATGATTACGG TTCAGGCAGT GACACATTGG CACAGAAGAC CCGCTACGAA TATCAGGCTT ACCTGAGCTA CAACGTTTCA CCGCAAACCC GGTTTGCCGT TGGTGGAGGC CATATTGATG GCGGAGAAAA CCGGGTGGGT GGCGTCAATC AAGACGATCA ACTGAGCACT ACCTACCTGC GTGTGAGTGC CACTCACATG CTGACCCCGT CGATTCAGGT CCAGGCCGTA CTCGGCAGGG ATGTAGAAGT GGAGGAGGGC TTCCGGGAAA AGTCCCGCTT GAATCTGCGA CTGGCGAAAC TGTTTTAG
|
Protein sequence | MQRLNLVARS VLASSTMLCW STVTHALEIT AGDYEPLPVG MNALLVYAQH AESSDFYSNG QKVSDDFRLK TDVSLLRYIH SFALSNNAVI EPQFILPYGH LKAGGEASAL GQTTGAGDLI LGAPVKWTLA TANKDVFSVA PYLYLPTGSY ENDDTLNLGE NRWRLLLQAA YIHHFNARWA LDTAADVSWF SDNDDYGSGS DTLAQKTRYE YQAYLSYNVS PQTRFAVGGG HIDGGENRVG GVNQDDQLST TYLRVSATHM LTPSIQVQAV LGRDVEVEEG FREKSRLNLR LAKLF
|
| |