Gene CND01310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCND01310 
Symbol 
ID3257312 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006686 
Strand
Start bp371577 
End bp374150 
Gene Length2574 bp 
Protein Length529 aa 
Translation table 
GC content47% 
IMG OID638256067 
Productconserved hypothetical protein 
Protein accessionXP_570378 
Protein GI58266444 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ACCATCTAGG ATATATTGAT ATGCCGTGAG CTGCAACTTG TTCTTTTAAT AATCTCCATC 
TTGCCCATCG ATTATCTCTA AGCACTCAGC GAGGACCACC TGGCAACTCG CCCTTTCCAC
CCAACCCTCT CGACGGAACG ACAGCCCTTA CCAGCTGGGA AAAAAGTCAA TCGGGCAGCT
GTCGTTCAGT CCCTAGTGTA ACATCGAATG GTCCGAAAGC CCTAGCCTGG GAATCATTTG
TGTCAATCAG CCCTTGGCTT CACTCAGCTT GCGGTCCAGT CATCGCGGTC AACTCAACTT
TATTACTACT ATCAGCAGTG TCCAACCACT ATGTCTAACC AACCCATTGC TATTCCAATG
GATATGGAGG GAACTTTAGA GTATACCCCC TCCCGCCATT CACAAGAAAC GCATCATAAA
AGCCAGTATG TGTTCAAGCG GCAGAAGAAG GAAATGCCTC TCCCAAGTAA GCGAATGGCT
ATTACCATGC TGTAAGTGTA CTTGCTTGGA ATTCTCTGAA AGGCTGATTA AGACTTTCCG
TACAGATGCG TTTTGTTCCT TGTCATGTTT CTTGCCGGAT GGAATGATGC GAGTCAAGGA
CCTCTTCTTC CATCTCTTCA GCTCTACTAT AATGTTGGTC ATGTCTTTCG AGTTTACCCC
TGCATTTGCT GATATAACAT TTAGGTTGAC TATCTTGTCA GTAAGTGCTT CAAACCATAA
AACAGTCAAG GGCTCTGTTT GACTCTCCTC AGTTTCTATA ATCTGGATCA TGAACTTTGT
AGGATTCATG ATTGCTGGAC TTACCAACGT CCTCATCACG GATAGGTTTG GTTTCGGTAT
AGCTGCTCCT TTTGGGGCAT CCATGCAAGC GGTAGCATAT GCGCTCATTT GCTGGGGTTG
TCCCTACCCA TTGTTCCTAA TCGCGTACAT ATTCAATGGC TTTGGTTTAG GTCTGCAAGT
GAGTTGGTGT CGCATATAAT GAGACCGGCA TACTAAGTAG AGCTTCTAGG ATGCCCAAGT
CAACTCTCTA ACCTCGCGAC TACCTAACGC GTCGACTAAA ATGTTCTTGA TGCACGCTTG
GTACGGTTTC GGCGCGACAG TTTCGCCATT CGTCTCCACC GCTTTTGTGC AGCACGTACA
ACAACGAGTC TATCTCTATT TTGCCGTGTC TTTAGGTTTG GCGATTGTGA CCATGATTTT
TCTGATTTCT GTTTTTCGTT TGCGAACAGA TGATCAGGTT GTTGGTAAAA GGGAAGAGAC
GGACCAGAAG AGCCCAGCTA GCTCTGATGT GCCTGCGGCT GTGAACTCGG AGGGGCAGCT
CAGCGAAAAG AAGCCGAAAC AGAATAGTGG CAGTAAGATG AAGCGAATCA TGAAGACACC
GGTGGTGCAT TGTATGGCGT TCTACATGGT GATATATGTA AGTTCGCTTG GCTAAAATCG
GATCATTTTG ATCATGTACT AAGACCTCAA ATATAGGTTG GAGTAGAAGT CACCATCGGA
GGATGGGCTG TAAGTTCATC CTATGATTTC TATCAAAATA AAATCGGCGT TGATCTCCAC
ACAGACATCT TTCCTCATAG ACGAAAGAGG AGGTGATGAT AACGCTGGCT ATGTGTCAGC
AGGGTACTTT GGAGGTAAGC TGCAACACCC GTCTGTGATT CTATTAGTGA CTCATTTTCG
TGCTTCAAGG CTTAACGCTA GGCCGTGTCG CCCTTATACC CGTTTCCAAC TGGCTGGGCC
CTCACATCTC GATATGGCTA TAGTGAATGG TTTCCTGTCG AATTTGAAAT ATTACGCGCT
GACAAGTGCA TAGCACTGTG CTCTCGATTG TCCTTTCCAT CGTCATTTGG GTCACCCACT
CTATCGTGGG CAACGCGATT TGCTTCTCCT TTATTGGTGT CTTACTCGGC CCTATGTATC
CTTTGGTCAT GAATGTAGTG GTAGAAGTCC TACCTGGAGA GCTGCAAGGT GGAACTATTG
GCTGGATCGC CAGTTTGGGT CAAGCGGGGA GTGCTATCAT GCCATTGTGA GTGATCTATC
TGCTTATGAG GAACAAAAGT TGATCCTTGG AGACCATAGT ATTACAGGTG CCATATCGGA
AAAAGTAAGT TTCCCCATTG ATACGATGCG TCTACAGGAC TTACCTGTGT GCTTTGTAGC
ACGGCGTCTG GATCCTTCAG CCACTGATCA TTGCTTTCAT GTGTGCCTCC CTCCTTCTAT
GGATGTTTGT CGTACGCGCC AGCCATCCCA ATCGATCTTT CTGGTGTATT CCGAGAGCTG
TGACAGCTCA GCCCGACAAG GAGGGAGTAC ATCATGAAGT TCCATTGGAG AGCAGAGTTG
AGGAAAGGCG CGAATGTGAG GAGCTCTGTG ACGGCCAAGA TAATGGTCAC ATAGAGGATC
TTAAGTGGAG ACGCTCCATT AGGGAGGCCG AAGCAACGCC GACGAAGGGC TTATGAACTG
TTCTGATCTG GAAGGTATGT ATGTCATAAT GTTTGGGTGG ACAATATTCA AACGGTGTAA
GCCAATGATG TGAGAACGGG AGCATGCACG TAATGCATGT TTTTAAAGAC CAAT
 
Protein sequence
MSNQPIAIPM DMEGTLEYTP SRHSQETHHK SQYVFKRQKK EMPLPSKRMA ITMLCVLFLV 
MFLAGWNDAS QGPLLPSLQL YYNVDYLVIS IIWIMNFVGF MIAGLTNVLI TDRFGFGIAA
PFGASMQAVA YALICWGCPY PLFLIAYIFN GFGLGLQDAQ VNSLTSRLPN ASTKMFLMHA
WYGFGATVSP FVSTAFVQHV QQRVYLYFAV SLGLAIVTMI FLISVFRLRT DDQVVGKREE
TDQKSPASSD VPAAVNSEGQ LSEKKPKQNS GSKMKRIMKT PVVHCMAFYM VIYVGVEVTI
GGWATSFLID ERGGDDNAGY VSAGYFGGLT LGRVALIPVS NWLGPHISIW LYTVLSIVLS
IVIWVTHSIV GNAICFSFIG VLLGPMYPLV MNVVVEVLPG ELQGGTIGWI ASLGQAGSAI
MPFITGAISE KHGVWILQPL IIAFMCASLL LWMFVVRASH PNRSFWCIPR AVTAQPDKEG
VHHEVPLESR VEERRECEEL CDGQDNGHIE DLKWRRSIRE AEATPTKGL