| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CNB00270 |
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| Symbol | |
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| ID | 3255975 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Cryptococcus neoformans var. neoformans JEC21 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_006684 |
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| Strand | + |
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| Start bp | 77609 |
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| End bp | 79104 |
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| Gene Length | 1496 bp |
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| Protein Length | 399 aa |
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| Translation table | |
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| GC content | 62% |
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| IMG OID | 638254679 |
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| Product | nuclear pore protein seh1, putative |
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| Protein accession | XP_568769 |
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| Protein GI | 58262718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0000774214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGCAGA CCGACCTGCT CGCCCCCGCG CACGCAGACC TCGTCACCCG TACGTCCCGT
CGCCCCGTCG CCTGTCCCCG GCGCAGCTCA CTCCGCCTGC AGACCTCACG TACGACTACT
ACGGCGAACG CCTCGCAACA TGTTCCGCCG ACCAGCGCAT AAAGGTCTTT CGGAAAGACG
AGCACGGTAA ATGGGCCGAG GACGCCAACT GGAAGGTGAG TGCACAGACC GCCGGCGCCG
GCTTACCGCA AAGGCCCACG ACGCGCCCAT CCTCCACCTC TCCTTCTCGC ACCCGATCCA
CGGCTCCCTC CTCGCCTCGT GCTCCCACGA CCGCACAATC CGTATCTGGG AAGAACCCTC
CTTTTCCACG TCCGCCACCG CCCCCGCCGC CTCCACCTCG CGCGCATGGC TCGAGCGCGG
TATCCTCACC GGCCCCACCG GCGCCATCCG CTCCGTCCAA TTCGGCCCCC CGGACCCCGC
CCACGGCCTG CGTGTGGCCA GCATCGCCAC CGACGGATAC CTGCGCGTCC ACACCTCGCT
CGACCCGAGC CTGAACGACT GGTCAGAGGT CGTCAGGATC CACGTCCCTT CCCTTCCCGG
CCCGTCCTCC GCGCCCAGCG ACGACGGCGG CACCGGCACA GCGTCCTCCT CTGCCGCGGG
CACGGGTCTC ACAGGGACAC TTGCCATGGC CAGTGCCGCG GGCGACAGTG GGGGCACGAG
CCATCACCCG CACACATCTG AACTGGCCAC GGGCGGATGG GGACTCAGCT GGTGTAAAGA
ACGATGGTGG GGTCCTCTCA TCGCCGTCTT TGCAGGTACC TCCCCTTCCC TCAAACTCGT
CTCCCTCTCC CCTACCCCAT CATGCGTCCT GCTCCTCACT CCCTCCTCCA CTCCTTCCAC
CACCTCTTCC GGCCCCACCC AGTACGCCCC ACTAACATGC CTCGCATGGG CACCCAACTG
CGGGAGAAAC TACCACCTCT TGGCCACCGG CGCTCGTGAC GGCACCATCA GGATATGGCG
AGTCGAACCC CCCGGCGAAC GGGGCAGAGT CGATTACGAC ACTGGCGGCG AAGTGGTCAA
AGAGTGGAGG GGGCAGTGTA CCGGCGAGTT TGGAAAAGGT GGAGCAAGGA TCGGCACGGT
GGATGTACGT CCTCTCCTTT CTCTCCCGTC CCACTCGAAA CTAACCTTTG GCTTGGCCCA
CAGTGGAACG CAACAGGTAC AATGCTATCT ACAACAGACG ACGAAGGTAT CGTCAGAATA
TACAAACGTG CGTTCTTTGA TCCCCGGACA TGACCACAAC TAACATCCCT GATGCGCTAG
CTACGTACGC AAGAAGCTGG AGTCTCCTCG GATCGTTGGC GGCGGAAGAA CCTCCCCTGG
AAGACGGTTT GAATGGCCAT TAAAAATCCT CGAAGCAAGA GGCGATAAAG TTACATTTTA
TTTAATATGT ATAGCATCAG CAAATGCCAG ACTAGACAAA AATGCATGCA TACTTG
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| Protein sequence | MLQTDLLAPA HADLVTHLTY DYYGERLATC SADQRIKVFR KDEHGKWAED ANWKAHDAPI
LHLSFSHPIH GSLLASCSHD RTIRIWEEPS FSTSATAPAA STSRAWLERG ILTGPTGAIR
SVQFGPPDPA HGLRVASIAT DGYLRVHTSL DPSLNDWSEV VRIHVPSLPG PSSAPSDDGG
TGTASSSAAG TGLTGTLAMA SAAGDSGGTS HHPHTSELAT GGWGLSWCKE RWWGPLIAVF
AGTSPSLKLV SLSPTPSCVL LLTPSSTPST TSSGPTQYAP LTCLAWAPNC GRNYHLLATG
ARDGTIRIWR VEPPGERGRV DYDTGGEVVK EWRGQCTGEF GKGGARIGTV DWNATGTMLS
TTDDEGIVRI YKPTYARSWS LLGSLAAEEP PLEDGLNGH
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