Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CNA00950 |
Symbol | |
ID | 3253871 |
Type | CDS |
Is gene spliced | Yes |
Is pseudo gene | No |
Organism name | Cryptococcus neoformans var. neoformans JEC21 |
Kingdom | Eukaryota |
Replicon accession | NC_006670 |
Strand | + |
Start bp | 262541 |
End bp | 266285 |
Gene Length | 3745 bp |
Protein Length | 1100 aa |
Translation table | |
GC content | 53% |
IMG OID | 638252427 |
Product | mRNA export factor elf1, putative |
Protein accession | XP_566522 |
Protein GI | 58258219 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.484404 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCTCCCG TCGTAGCTCC TTCCACCGCC CTCCCACCTT CCACCCACCT TGAGAAACTC ACCGCCCTTG CCAACGCGCC TTCCAACGTC GAAGCCAAGT CTATCGCCGA CGGCATCGCC CTGGACCTCA AAAAGGCCCC GCGCACTCTT GACGCTCTCC AGGATGCTCG TATCGTCGAT GTCGTCCTTG CCTGGGCTTC CTCCAAGTCT GGATACGAGC GCGAGTCTTC TGTTGTCCTT GTGGAGCGTA TTTGTCGTTC CCTCGGATCT GGTATCGAAG GTGTCTTCCT TCCTTTAATC CCTGCGATCT TGAACCTTGC CATGGACAAG GGCCAACCTG TGAGGAGCGC AGTGAACAGT GCGATGACCA GTTTGATCAA GGCTACCGCT CCTGAGGGTG CGCGAAAGGT TTTTGAGGTG CTTACCAGGG TTTTGGAGGA AACCAAGGGT TGGAGAACCA AGATTGCGGC CTTGAAGGCG ATGGAGGGGC TCGTCAAGCC CGGTGCGGAA GATTATGTTG CCAACGAGTT GGGTACCGTC ATCCCTGTTG TTGAGCATGC CATGCACGAC ACCAAGGCCG AGGTGAGTAT TGTATTATTA TAAATGCAGA CATTCGCTTA TGCCCATTCA GGTCTCTACC GCCGCTCGAA AAGCCGCGAC TACTCTTTGT GGTATCCTTC CCAACGCTGA TGTACTCAAG CACGTCAACC TCCTCGTTTC CGCCATGGCT TCCCCGGCTG CTGTGCCCTC TACCATCAAG GGTCTTTCCT CCACCACCTT CGTCGCCGAA GTCAACGGCC CCACCCTTGC CGTCATGGTT CCGCTTTTGA CCCGTGCCCT CAAGGAGCGT TCCACCGACA CTCAACGAAT GACCTGTGTC GTTATCGGTA ACCTTGTCAA GCTCGTCCGC GATCCTACCG TCGCCGCCCG ATACCTCGGT CCTCTCTTTG GCGGTGTCCA GCAAATCGCC ACCGGTGCCG CCTTCCCCGA GATTCGAGCC TTCGCTCAGA CTGCCCTCGA CATTCTTATC GGCGCTGGTG CCTCTGCCAG TGCCACTCCC TTGCCCCCTC GAGACGTTAT CCTTTCTGTC ACCGAAGCCC TTACCGTCAT GGCTCCTCAT CTTCAAATTC CCGGCTTCCC CGCTCACCCT TCCATCCCCC TTTCCGCCTC GCTCCCCAAC AGCCCTGTCA TCGCCCACGC TGTCGAGTAT CAAGCCAACG TTGTGGCCGA CCTCGTCGAC CTTCGTCGAT GGGACGCTTA CATCTGGGAA GGCAAGGCTC TTGGTTCATT CATGAAGCTC CTCCAAGGTG CTGAAGAAGG TGCTAAAGCC ACCGCCGAGA TCCGCAAGGC ATTCATGGAC ATTGACAAGG CCAAATATTC TCCTCCCGAG GAGGACGACG GGTCCGAGGG TCAGTTGTTG TGTGACATCC AATTCTCCCT TGCTTATGGC GGTTTGCTCT TGCTCAACCA CACCAACTTG AAGTTGAGGC GAGGCAGGAG GTATGGTATC TGTGCCGCCA ACGGTGCCGG CAAGTCCACA TTAATGAAGG CTATCCGTGA CGGTAAAGTC GAGGGCTTCC CTCCCCAGGA AGAGCTTAGG ACGATTATGG TTGAGCATGC CCTTCAGGGC GAGGATACTT CCATGGCTAT CATTGACTTC ATCGCCGCCG ACCCCAAGCT TACGCACAAG ACCAGGGCCG AGATGGCTGC GATGCTCTTG TCCCTCGGTT TCTCGGAGGA GAAACAGCAA GACCCAGTGG CATCTCTTTC CGGTGGTTGG AAGATGAAAT TGGAATTGGC CAAGGCCATG TTGATCGGTG CCGACATTCT TTTGCTGTAA GTTTGGCCTC TTTATCGATC TAAAATCCGA TCATACTGAC TTTGGGATTC AGCGACGAAC CTACTAACCA CTTGGACGTC CAAACTGTCG CTTGGCTTGA GGAATACGTC TGCAGCTTGC ACGACATCAC CTGTATGATC GTCTCGCACG ACTCTGGTTT CCTCGACAAC GTTTGTACCG ACATTATCCA CTATGAAAGC AAGAAGCTCG TGTATTACCC CGGTAACCTC TCCAAGTTTG TCGAAAAGGT CCCTTCTGCC AAGTCCTACT ACACTCTTGC CGCTACTTCT ATCAAGTTCA CCTTCCCTCC CCCTGGTAAC CTCGTCGGTG TCCGATCCAA TACACGAGCG ATCCTCAAAC TTACCAACTG TACATTCACC TATCCTGGTG CCCCCAGACC TTCTATCAAG AATGCTTCTT GCTCCCTCTC CCTTTCTTCC CGAGTCGGTA TCGTCGGTCC CAACGGTGCC GGTAAATCTA CCCTCATCAA GCTCCTCACC GGTGAGACTG TCCCACAAGA AGGTTCAGTA CACAAGCATC CTGCTCTTCG TGTCGGTTAC GTCGCCCAGC ACGCGTTCCA CCATATCAAC CAGCACTTGG ACAAGACCGC TGTACAGTAC ATCCAGTGGC GATACCAGGA TGGTCACGAT AGGGAGATGA TGGAGAAGGC TACCCGTGTC CTGACTGACG AGGACAAGGA AATGATGGAA CGCCCTATTG AAGGGAAGAA TGGCGAATTG AGAAAGATTG AATACATCCT CGGTCGACAA AAGCTTAAAA AGTCTTTCCA GTACGAAGTC AAGTTCAGGG GTTACGACCA CAGGTACAAT GCCTGGATCG GGCGAGATGT CTTGATCGAA AAGGGTTTCC AGAAACTTAT CACCCAATTC GATGACTTGG AGTCTTCTAG GGAAGGTGCG GGTATGAGGG ATACTGGTGC AAATGCTGTC AGGGAGGTTT TGGAAGCTGT GGGTTTGGAC GGCGATATCG CGCAGTATAA CGAGATGTCT GGTTTGTCCG GTGGACAAAA GGTCAAGGTC GTCATCGCAG CTTCCATGTT TAATCGGTAA GTCTATCTGT ATACTTCCAC TCTCTCAATT TCAGTTTAAA CTAACCTTTG GCCTTGCTTT TAGACCTCAA TGTCTCTTCC TCGACGAACC TACCAACTTC TTGGACCGAG AAGCCCTCGG TGGTCTCGCT GTCGCTATCA AAGAATGGGG AGGTGCCGTC TGCATCATCT CGCACTCTAC CGAATTCGTG ACTGCCCTCT GTCCCGAAAT CTGGCACGTT GACGGCGGTG TACTTACCCA CCAGGGTAAA GTCGCCCTCG TCGAAGACGC CTTTGATGAC CCCTCCCGGC CCGGATCCCG AGTGGCTAGC AAGGCTGGCA CACCTAGGAC TATGCCCAGT ACTCCCGGTA CGGCTACAGG CACGGCTACT CCCGCCGAGA GTGTGGCGAC GGATGGAACG GTGGATGATG TCGCCGATGG TTTGGCCAAG TTGATGGAGA AGAAGAAAAA GAAGAAGAAG ATGACCAGGA ATGAGTTGAA GGCTCAGGAG GAGAGGAGGA GGTTGAGAAA ATTGAACTGG CTTAATTATG GTGGTGAGTC TTTCATCTCT TCCCATCTTT GTAAATTTTG TGTGGTAAAC TGACTTGTCT TATGTTTTAG GTGAGCGTGA GCCCGACACG GATGACGAGT GAGGAAAAAG AGAGTCAAAA GAGGTGTCAA GTTGTAAACC TTTTCTCAAG GCAATAGAAT AGATGCGATC GTGTTTGTGG TCGTTTTACA GTCTTCATTT TCTCAAATCG GTTTTCTTTA CCTTTATCTT TCTTCTTTGT TTTCTTTTTG GTTGTGTAAT TATACCTTAA TGGAGCGGTC TCGTATCTCT TTTGATTATG AAACA
|
Protein sequence | MSPVVAPSTA LPPSTHLEKL TALANAPSNV EAKSIADGIA LDLKKAPRTL DALQDARIVD VVLAWASSKS GYERESSVVL VERICRSLGS GIEGVFLPLI PAILNLAMDK GQPVRSAVNS AMTSLIKATA PEGARKVFEV LTRVLEETKG WRTKIAALKA MEGLVKPGAE DYVANELGTV IPVVEHAMHD TKAEVSTAAR KAATTLCGIL PNADVLKHVN LLVSAMASPA AVPSTIKGLS STTFVAEVNG PTLAVMVPLL TRALKERSTD TQRMTCVVIG NLVKLVRDPT VAARYLGPLF GGVQQIATGA AFPEIRAFAQ TALDILIGAG ASASATPLPP RDVILSVTEA LTVMAPHLQI PGFPAHPSIP LSASLPNSPV IAHAVEYQAN VVADLVDLRR WDAYIWEGKA LGSFMKLLQG AEEGAKATAE IRKAFMDIDK AKYSPPEEDD GSEGQLLCDI QFSLAYGGLL LLNHTNLKLR RGRRYGICAA NGAGKSTLMK AIRDGKVEGF PPQEELRTIM VEHALQGEDT SMAIIDFIAA DPKLTHKTRA EMAAMLLSLG FSEEKQQDPV ASLSGGWKMK LELAKAMLIG ADILLLDEPT NHLDVQTVAW LEEYVCSLHD ITCMIVSHDS GFLDNVCTDI IHYESKKLVY YPGNLSKFVE KVPSAKSYYT LAATSIKFTF PPPGNLVGVR SNTRAILKLT NCTFTYPGAP RPSIKNASCS LSLSSRVGIV GPNGAGKSTL IKLLTGETVP QEGSVHKHPA LRVGYVAQHA FHHINQHLDK TAVQYIQWRY QDGHDREMME KATRVLTDED KEMMERPIEG KNGELRKIEY ILGRQKLKKS FQYEVKFRGY DHRYNAWIGR DVLIEKGFQK LITQFDDLES SREGAGMRDT GANAVREVLE AVGLDGDIAQ YNEMSGLSGG QKVKVVIAAS MFNRPQCLFL DEPTNFLDRE ALGGLAVAIK EWGGAVCIIS HSTEFVTALC PEIWHVDGGV LTHQGKVALV EDAFDDPSRP GSRVASKAGT PRTMPSTPGT ATGTATPAES VATDGTVDDV ADGLAKLMEK KKKKKKMTRN ELKAQEERRR LRKLNWLNYG GEREPDTDDE
|
| |