Gene CNA00560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCNA00560 
Symbol 
ID3253485 
TypeCDS 
Is gene splicedYes 
Is pseudo geneNo 
Organism nameCryptococcus neoformans var. neoformans JEC21 
KingdomEukaryota 
Replicon accessionNC_006670 
Strand
Start bp156179 
End bp157681 
Gene Length1503 bp 
Protein Length238 aa 
Translation table 
GC content49% 
IMG OID638252389 
Producthypothetical protein 
Protein accessionXP_566483 
Protein GI58258141 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5171] Ran GTPase-activating protein (Ran-binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTAAATCAAA TCAGAAACAA TGGCTGAACC CACCGAAACC GTCAACACCG GCGTGAGTCC 
CTCATCTTTT GGTCTTCTCT CTCACCAAGC ATAAAATATC GACCCCTGTA TACGTACCAA
GTTGGGATTT CGTGTAGAGG ACGGTATCCT TCATACTAGG CGTATGGCTT TGGAGGACGC
AAATACCCAA ATAACTTGGT CGAGGAAGGG TTGAGATAGA CGAGTGCTGA CGTTCCTTCC
CTGCCTTTTA GGAAGAGCAT GACCCCCAAT TCGAGCCGGT AATCCGTCTC ACTGAGCAGG
TCGAGGCTAA GACCTTTGAG GAGGATGAAG AGCCTCTCTT CAAAATGTAC GTCGTCCCCT
CCTTTGGCTT TTCAAATGCC TTCTGCTGCT ATTCAGAAAG AAGCCATCCC CAAAGAGTCA
TGGTTTTTCG GAAAAAAGAA GAAAAGATAC TGATTGTCGA ATAATTAATG CAATTGGATA
ACAGGCGAGC GAAGCTTTTC CGATTCCACA AGGACACTAC TGAGTGGAAG GAGCGTGGTA
CCGGTGACGT CCGATTGCTC AAGCACAAGC AGAGTGGCAA AGTCCGACTT GTTATGCGTC
GGGATAAGAC TCTGAAGGTC TGCGCCAACC ATATCCGTAC GTTCTCTAAC TGTCATCACT
TATTTCATAA CTGAAGGGGC AATTAAACTT GAATTCTGAA CCGATTTGAA ACAGTCTCTC
CTGACATGAA GCTTTCTCCC AACGTCGGTT CTGACCGATC TTGGGTCTAC AACGTTGCCG
CCGACTACGC TGAGGGTGAG GCTTCCGCCG AGACCCTTGC CATCAGGTTC GGTAACTCTG
AGAGTGAGTA TTCTCTCTCT CTTCACCTCC ACCATATCCT TTGCATCAGG TGATACAAAA
GATCTGGATT ACTGATATCG GCTTTCATCT GTCTAGATGC CAACCTCTTC AAGCAGGCAT
TCGAGGATGC CCAGGCCCAC AATGCTAGCT TGAGCGGTGC CGCTCCCAAG GAGGAGGATG
AGTCCGCCGC CGTTGCCAAG CCTGAAGCTG CCGCCGTAAG TTGTAATATC CAACTCATAA
TTTCATCCTC CCACTCATTC TCCCTTTTCT TTCATTTCTC TCTTCTTTCA TTTTCTTCGC
CTTCACAAAC TAATCCATCC TTCTTTTCCT AGGAGTCCGC TGCCCCCGAG GCCGAGGCTA
AGAAGGAAGA GGCTTCCACC CTTGAAGAGT CCAAGCCCGA AGAGCCCGCC ACCGGTGCCG
AAGCCGAGAC TAAGGTTGCC GACGCCCCCG CCGCTACCGA GATCAAGGAG GAAGGAATCC
GTGAGGCTGA TGAGGCTGCC GCTGAGAAGA AGGATGAGTA AACGTACATA GTGACGAAAA
CAATGAGGAG CGGGGAATGA GAAGGAAAGA AAAAGGGACT TGAACTTTTT TTACTTTTAT
CCTTTTTCGT GTAGGATGGT GGATAGGGAT GAGATGAGAT GCGCATATGA CTTGATGTCC
TTT
 
Protein sequence
MAEPTETVNT GEEHDPQFEP VIRLTEQVEA KTFEEDEEPL FKMRAKLFRF HKDTTEWKER 
GTGDVRLLKH KQSGKVRLVM RRDKTLKVCA NHILSPDMKL SPNVGSDRSW VYNVAADYAE
GEASAETLAI RFGNSENANL FKQAFEDAQA HNASLSGAAP KEEDESAAVA KPEAAAESAA
PEAEAKKEEA STLEESKPEE PATGAEAETK VADAPAATEI KEEGIREADE AAAEKKDE