10 homologs were found in PanDaTox collection
for query gene CNA00560 on replicon NC_006670
Organism: Cryptococcus neoformans var. neoformans JEC21



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_006670  CNA00560  hypothetical protein  100 
 
 
238 aa  475  1e-133  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  n/a   
 
 
-
 
BN001308  ANIA_00084  Ran-specific GTPase-activating protein 1, putative (AFU_orthologue; AFUA_5G12180)  75 
 
 
242 aa  228  5e-59  Aspergillus nidulans FGSC A4  Eukaryota  normal  normal 
 
 
-
 
NC_009068  PICST_80880  predicted protein  67.67 
 
 
199 aa  201  7e-51  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.500388  normal  0.361708 
 
 
-
 
NC_011669  PHATRDRAFT_42712  predicted protein  41.18 
 
 
219 aa  121  8e-27  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_009364  OSTLU_10538  predicted protein  41.12 
 
 
109 aa  87.8  1e-16  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  hitchhiker  0.00802645 
 
 
-
 
NC_009045  PICST_83705  nuclear pore protein  38.89 
 
 
740 aa  61.6  0.000000009  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.170076  normal  0.0148486 
 
 
-
 
NC_006679  CNJ02370  conserved hypothetical protein  40.54 
 
 
520 aa  51.2  0.00001  Cryptococcus neoformans var. neoformans JEC21  Eukaryota  normal  0.967487  n/a   
 
 
-
 
NC_009374  OSTLU_25876  predicted protein  33.06 
 
 
316 aa  49.3  0.00005  Ostreococcus lucimarinus CCE9901  Eukaryota  normal  normal 
 
 
-
 
NC_009045  PICST_60985  predicted protein  39.76 
 
 
199 aa  47  0.0003  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  0.748539  normal  0.431532 
 
 
-
 
BN001301  ANIA_10754  nuclear protein export protein Yrb2, putative (AFU_orthologue; AFUA_2G10810)  29.23 
 
 
493 aa  45.8  0.0006  Aspergillus nidulans FGSC A4  Eukaryota  decreased coverage  0.000820278  normal  0.753228 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>