Gene lpp0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus taglpp0178 
SymbollvhB10 
ID3117272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLegionella pneumophila str. Paris 
KingdomBacteria 
Replicon accessionNC_006368 
Strand+ 
Start bp202276 
End bp203378 
Gene Length1103 bp 
Protein Length363 aa 
Translation table11 
GC content45% 
IMG OID637578873 
Producthypothetical protein 
Protein accessionYP_122524 
Protein GI54296155 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2948] Type IV secretory pathway, VirB10 components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
AGGAGGCCAA AATGAGTATG GATGATAAAA AGCGGGAAGA TTCTCTGGGC AATCGGACTC 
AGGTTGCTAA AAACCCAAAA CACAACGCCA TGAAAGACAA GTTATTGCTC GCAGGCGTTG 
TAATCATTTG TATTGTCATC GGTATTGGCG GATTACTGCC CAAACGAAAA GCAAACTCGG 
TCAATGAACC CGATGAAAAA CAAAGTTTAA GCATGGCTTT AAACCAAAAT CTGGAGCTGA 
TTGCAGCCCT TAAAGAGAAA AATGCAACAG CGCAAACAGG TTATAAAGGT AGCGATCCAA 
GGCATCCCCC CGTACTAAAA ACCATCCAAT CGCAAACGGT TAGCAAGGAA ACTCTAGCTC 
GAATGAATGC ACCCTCCACC TTTTTTAATT CAGGAGGTAA TGAGGTGATA AGTACTGCAA 
CGGGCGGCGA AGTTCAAGCC AGCAAAACCC TGACAGGTCG CGATGGAAAT TCTGAGTTTT 
TGAATCAGCA AAATGACATT ACCTCTGTTT CTGCAAAACG ATTACCCCAT CCAGCCATGA 
CAGTACCTGC CGGAGAAATG ATTCCTGCAA CACTCGAAAC GGCGATTAAT TCTGAGCTTG 
CTGGTATGGT ACGAGCCATT ACAACACGAG ATATCTTTGC TTTGGAAGGC AGCAAGTTAT 
TAATCCCCAA AGGATCCACG CTAGTCGGAC AATTTAATAC CGCAATTACC CAAGGCCAGA 
GCCGAATCTT TGTCGTATGG AATCGTCTGC AGATGACCAA TGGCGTGATT GTCACCCTAA 
ATAGTCCAAG CAGTGATCCA ATAGGTCGTT CAGGACAAGC AGCTGATTAT ATTGACCGCC 
ATTTCTTTGA GCGTTTTGGT ACTGGTGCGC TTTTGTCGGT TTTGGGTGCC TATACAGCAA 
CAGGCGGGGT TAATGGACAG GATGAATACA ACTCCAGATC ACAATACCGC ATGAACATTG 
CCAGCAGCTT CCAACAAGCC GCAAATCAAA CACTACAGCA AGACATGCAA ACACGCTCGA 
CTTTGCAAAT TAATCAGGGA GCTGCCATTA ACGTATTTGT AGCTCACGAT CTTGATTTCT 
ACCGTGTGGC AGGGAGGGCA TAA
 
Protein sequence
MSMDDKKRED SLGNRTQVAK NPKHNAMKDK LLLAGVVIIC IVIGIGGLLP KRKANSVNEP 
DEKQSLSMAL NQNLELIAAL KEKNATAQTG YKGSDPRHPP VLKTIQSQTV SKETLARMNA 
PSTFFNSGGN EVISTATGGE VQASKTLTGR DGNSEFLNQQ NDITSVSAKR LPHPAMTVPA 
GEMIPATLET AINSELAGMV RAITTRDIFA LEGSKLLIPK GSTLVGQFNT AITQGQSRIF 
VVWNRLQMTN GVIVTLNSPS SDPIGRSGQA ADYIDRHFFE RFGTGALLSV LGAYTATGGV 
NGQDEYNSRS QYRMNIASSF QQAANQTLQQ DMQTRSTLQI NQGAAINVFV AHDLDFYRVA 
GRA