Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCZK4818 |
Symbol | vacB |
ID | 3026000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus E33L |
Kingdom | Bacteria |
Replicon accession | NC_006274 |
Strand | - |
Start bp | 4910465 |
End bp | 4912897 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637549051 |
Product | ribonuclease R (RNase R) |
Protein accession | YP_086389 |
Protein GI | 52140440 |
COG category | [K] Transcription |
COG ID | [COG0557] Exoribonuclease R |
TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases [TIGR02063] ribonuclease R |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.174115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAGAAA TCATACAAGA ACATATTGAT AAGTTGTTAT TATTTATGAG AGAAGAAGCG TATAAACCGC TAACGATACA AGAGTTAGAA GAGGCATTTG GGATTGAAGG TTCTGAGGGC TTTAAAGATT TCGTAAAGGC ACTTGTAACG ATGGAAGAAA AGGGACTTGT TATTCGTACT CGTAGCAACC GTTACGGTCT TCCTGAAAAG ATGAATTTAG TACGTGGTAA GTTAATTGGA CATGCACGTG GCTTTGCATT CGTTGTACCA GACGAGAAGA AAACAGGAGA TGATGATCTT TTCATCCCAC CTACAGAATT AAACGGTGCA CTTCATGGCG ATACAGTATT AGCACGCCTT AGTTCCCAAT CGAGTGGTTC GCGTCAAGAA GGTTCCATTG TACGCATTTT AGAGCGTGGC ACGAAAGAAT TAGTTGGTAC ATATACAGAA TCGAAAAACT TTGGATTTGT TATACCTGAC AATAAACGTT GGACAAGTGA CATTTTCGTA TTGAAAAGCG CATCAATGGG CGCTGTAGAA GGTCATAAAG TAGTTGTGAA AATTACGAGC TATCCAGAGA ATCGTTTAAG TGCAGAAGGT GAAGTTATTC AAATTCTAGG TCATAAAAAT GATCCAGGAG TAGATATTTT ATCTGTCATT CATAAACATC ACTTGCCTTT AGCGTTCCCT GAAGAAGTGA TGGAGCACGC AAACAGTGTA CCAGAAACGA TTTCAGAAGA AGATTTAAAA GATCGCCGTG ACCTACGTGA CCAAATGATC GTAACAATTG ACGGTGCAGA CGCGAAAGAT TTAGATGATG CTGTTACAGT AACGAAGCTC GAGAACGGTA ACTATAAGCT TGGCGTTCAC ATTGCGGATG TAAGCCATTA CGTTCAAGAA GGTTCTCCAA TTGATGTAGA AGCAGCGGAA AGAGCGACGA GTGTATATCT TGTTGACCGT GTAATTCCAA TGATTCCACA TCGTCTATCT AACGGTATTT GTTCATTAAA TCCGAAAGTA GACCGTCTGA CGTTATCTTG TGAAATGGAA ATCAACAACT TAGGTGACGT TGTCAAACAC GAGATTTTCC AAAGTGTAAT TAAAACGACA GAGCGTATGA CGTATGCTGA CGTAAGAAGC ATTTTAGAAG ATGAGGACGA AGAATTAATT AAGCGCTATG AACCGTTAGT ACCGATGTTT AAAGAAATGG GCCAATTGGC ACAAATTTTA CGTGAAAAAC GTATGCGCCG CGGTGCAATC GACTTTGACT TTAAAGAAGC GAAAGTATTA GTAGATGAAG AAGGAAAACC GACAGATGTT GTTATGCGTG ATCGTTCTGT ATCAGAGAAG TTAATTGAAG AATTTATGCT TGTTGCGAAC GAAACAGTAG CAGAGCACTT CCACTGGATG AACGTACCAT TCATGTATCG TGTCCATGAA GATCCGAAAG AAGATAAGTT AGAGCGTTTC TTCGAGTTTG TAACGAACTT CGGATATGCG GTAAAAGGAC GTGCGAATGA AGTGCATCCT CGTGCGCTGC AACAAATTCT TGAAATGGTT CAAGGACAGC CTGAAGAAGT AGTCATTTCA ACAGTTATGC TTCGCTCAAT GAAGCAAGCA CGTTACGATG CAGATAGCTT AGGACATTTC GGTTTATCAA CGGAGTTCTA CACGCATTTC ACATCACCAA TTCGTCGTTA TCCAGATACG ATTGTTCATA GATTAATTCG TGAATACATC ATTAACGGTA AAGTCGACAA TGAAACGCAA GCAAAATGGC GTGAAAAATT ACCTGAGATT GCAGAACACT CTTCTAATAT GGAACGTCGT GCTGTTGAAG CAGAACGTGA AACAGACGAA ATGAAAAAAG CAGAGTACAT GGTTGATAAG ATCGGCGAAG AGTATGACGG TATGATTAGC TCTGTAACAA ACTTCGGTTT ATTCGTAGAG CTTCCAAATA CAATTGAAGG TCTTGTACAT GTTAGCTACT TAACGGATGA TTACTACCGT TATGATGAGC AGCATTTCGC AATGATTGGA GAACGTACAG GTAACGTATT CCGCATTGGT GACGAAATTA CAATTCGCGT TATTAACGTA AACAAAGACG AGCGCGCAAT TGACTTTGAA ATCGTTGGCA TGAAAGGTAC GCCTCGTCGT AAGTTCAAAG ACCGCCCAGT CGTTATCGAA CAGCCAAGAA CAGGCAGAAA GAAACGCGGT GGACGTAGCG AGCGTAGTAA TGAGCGCGGC GGAGAACGTG GCACAGGAAG AAAATTTGAC CGTGGTGGCA AAGGAAAAGG AAGAGGATCT GCATCCGCAT CCACATCTAC GTCCGCTAGC CAGCCAGGGA AAAAAGATGG TAACGGCAAG AAGAAAAAAG CATTCTTCGA AAACGTACCA GGATTCAAGA AGAAAAAGAA AAAGCGTAAG TAA
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Protein sequence | MEEIIQEHID KLLLFMREEA YKPLTIQELE EAFGIEGSEG FKDFVKALVT MEEKGLVIRT RSNRYGLPEK MNLVRGKLIG HARGFAFVVP DEKKTGDDDL FIPPTELNGA LHGDTVLARL SSQSSGSRQE GSIVRILERG TKELVGTYTE SKNFGFVIPD NKRWTSDIFV LKSASMGAVE GHKVVVKITS YPENRLSAEG EVIQILGHKN DPGVDILSVI HKHHLPLAFP EEVMEHANSV PETISEEDLK DRRDLRDQMI VTIDGADAKD LDDAVTVTKL ENGNYKLGVH IADVSHYVQE GSPIDVEAAE RATSVYLVDR VIPMIPHRLS NGICSLNPKV DRLTLSCEME INNLGDVVKH EIFQSVIKTT ERMTYADVRS ILEDEDEELI KRYEPLVPMF KEMGQLAQIL REKRMRRGAI DFDFKEAKVL VDEEGKPTDV VMRDRSVSEK LIEEFMLVAN ETVAEHFHWM NVPFMYRVHE DPKEDKLERF FEFVTNFGYA VKGRANEVHP RALQQILEMV QGQPEEVVIS TVMLRSMKQA RYDADSLGHF GLSTEFYTHF TSPIRRYPDT IVHRLIREYI INGKVDNETQ AKWREKLPEI AEHSSNMERR AVEAERETDE MKKAEYMVDK IGEEYDGMIS SVTNFGLFVE LPNTIEGLVH VSYLTDDYYR YDEQHFAMIG ERTGNVFRIG DEITIRVINV NKDERAIDFE IVGMKGTPRR KFKDRPVVIE QPRTGRKKRG GRSERSNERG GERGTGRKFD RGGKGKGRGS ASASTSTSAS QPGKKDGNGK KKKAFFENVP GFKKKKKKRK
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