Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_5164 |
Symbol | pip |
ID | 1186849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5876768 |
End bp | 5877739 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637396483 |
Product | proline iminopeptidase |
Protein accession | NP_794895 |
Protein GI | 28872276 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01249] proline iminopeptidase, Neisseria-type subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTT TGTACCCGCA GATCAAACCC TACGCCCGGC ACGATCTGGC CGTGGAACAA CCGCATGTGC TCTACGTCGA TGAAAGCGGT TCGCCTGAAG GTTTGCCTGT GGTGTTCATT CACGGTGGCC CGGGTTCTGG ATGCGATGCG CACAGCCGCT GCTATTTCGA TCCCAACCTG TACCGAATTG TTACCTTCGA TCAGCGTGGC TGTGGCCGCT CCACACCTCA TGCCAGCCTC GAAAACAATA CCACCTGGAA GCTGGTGGAA GACCTTGAGG TCATTCGCGA GCACTTGGGC ATCGACAAAT GGGTACTGTT CGGCGGCTCG TGGGGTTCGA CCCTCGCGCT GGCTTACGCT CAGACCCACC CCGACCGCGT GCATGCGCTG ATTCTGCGTG GCGTGTTTCT GGCCCGTCAG CAAGAAATCG ACTGGTTCTA TCAAGCGGGT GCCAGCCGCC TGTTCCCCGA TTACTGGCAG GACTACGTCG CCCCTATCCC GTTGGATGAG CGCAACAATA TTCTCGCTGC CTTTCACAAG CGTCTCACCG GCGCAGACCA GATTGCCCAG ATGCATGCCG CCAAGGCCTG GTCGACGTGG GAAGGCCGCT GCGCAACCTT GCGTCCCAAT CCTCAGGTGG TCGACCGCTT TACCGATCCG CACCGTGCCC TGTCCATCGC GCGTATCGAA TGCCACTACT TCATGAACAA GGCGTTTCTG GAAGAGAACC AGCTGATTCG CGACATGCCG AAGATCGCTC ACCTGCCGGC AATCATTGTG CACGGTCGTT ACGATGTCAT CTGCCCGCTG GACAATGCCT GGGAGCTGCA TCAGAACTGG CCCGACAGCG AGCTGCAGAT CATTCGCGAC GCAGGGCATT CGGCCGCCGA AACCGGTATC GCCGATGCGC TGGTACGTGC CGCTGCGCAG ATTGCGCAGA ACCTGCTCGA TCTGCCGCCC GAAGAAGCCT GA
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Protein sequence | MQTLYPQIKP YARHDLAVEQ PHVLYVDESG SPEGLPVVFI HGGPGSGCDA HSRCYFDPNL YRIVTFDQRG CGRSTPHASL ENNTTWKLVE DLEVIREHLG IDKWVLFGGS WGSTLALAYA QTHPDRVHAL ILRGVFLARQ QEIDWFYQAG ASRLFPDYWQ DYVAPIPLDE RNNILAAFHK RLTGADQIAQ MHAAKAWSTW EGRCATLRPN PQVVDRFTDP HRALSIARIE CHYFMNKAFL EENQLIRDMP KIAHLPAIIV HGRYDVICPL DNAWELHQNW PDSELQIIRD AGHSAAETGI ADALVRAAAQ IAQNLLDLPP EEA
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