Gene PSPTO_5027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5027 
Symbol 
ID1186712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5724197 
End bp5724871 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content61% 
IMG OID637396348 
Producttranscriptional regulator, GntR family 
Protein accessionNP_794760 
Protein GI28872141 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACG CTGCTCCCAC CCTGCCCCGC ACACTTGGAG AATCCATCAC CAAGGAGCTG 
CGCAGAATGC TGGTGGAAGG CGAGCTGGTC CCCGGTCAGC GCCTCTCGGA AGCGGCGCTG 
GCGGACAGCC TGCAGATCTC CCGAAACACC TTGAGAGAAG CGTTCAGAGT GCTGACCCGT 
GAAGGCTTGC TCACTCATGA GCCTAATCGT GGCGTGACCG TGGCCGAGCC GGACATGGCG 
TCGATCATCG ACATCTATCG CGTGCGCCGT TTTATCGAAT GCACGGCGAT TGCCCAGGCT 
TATCCGCAGC ATCCGGGCGT GCGGCACATG CGCGAAGCGG TCGAGGCGGG AGTCCAGGCG 
CGTGAAGCAA GCGACTGGGT GGCGGTCGGC ACGGCCAACA TGATGTTCCA CAAGGCGATC 
GTCGAGCTGG CTGACAGCCC GCGTCTGACG GCGTTTTATG GGCAGATCTC GGCAGAATTG 
CGCCTGGCCT TCGGTTTGCT GAACAATCCT GAATTGCTTC ACTCGCCTTA TCTGGACATG 
AACGCCGCCG TGCTCGGCTG TCTCGACGCT GGCAAGACCG ATGAGGCAAC GCGCATGCTC 
GAAGACTACC TGGTGCAATC GGAACGTACG ATTCTGGCCG CTTTCCAGCG CAACCGAACC 
GGCAGTCAGG CCTGA
 
Protein sequence
MNNAAPTLPR TLGESITKEL RRMLVEGELV PGQRLSEAAL ADSLQISRNT LREAFRVLTR 
EGLLTHEPNR GVTVAEPDMA SIIDIYRVRR FIECTAIAQA YPQHPGVRHM REAVEAGVQA 
REASDWVAVG TANMMFHKAI VELADSPRLT AFYGQISAEL RLAFGLLNNP ELLHSPYLDM 
NAAVLGCLDA GKTDEATRML EDYLVQSERT ILAAFQRNRT GSQA