Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4572 |
Symbol | |
ID | 1186255 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 5167536 |
End bp | 5168615 |
Gene Length | 1080 bp |
Protein Length | 359 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637395911 |
Product | pyridoxal-dependent decarboxylase, pyridoxal binding domain protein |
Protein accession | NP_794323 |
Protein GI | 28871704 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCATTG ATACCGCCAT CATCAGCAAG GCCTATGACG ACCTGCGTGC GGGCTTCGAT TTCGCCAAGG TTTACTACGC CGTCAAAGCC AACCCGGCCG TTGAAGTCAT CAATCTGCTC AAGGACAAGG GTTCGAGCTT CGACATCGCT TCGATCTACG AACTGGACAA GGTCCTGAGT TGCGGCGTTG GCCCTGAGCG TATGAGCTAT GGCAACACCA TCAAGAAATC CAAGGACATC CGCTACTTCT ACGAGAAGGG CGTGCGTCTG TTTGCAACCG ATTCCGAAGC TGATCTGCGC AACATTGCCA AGGCTGCACC GGGCGCGAAA GTCTATGTGC GCATCCTGAC CGAAGGCTCG ACCACTGCCG ACTGGCCTCT GTCGCGCAAA TTCGGCTGCC AGACCGACAT GGCCATGGAC CTGCTGATTC TTGCCCGTGA CCTGGGCCTG GTACCTTACG GCATCTCGTT CCACGTTGGC TCGCAGCAGC GCGACATCAG CGTCTGGGAC GCTGCCATCG CCAAGGTCAA AGTGATTTTC GAGCGCCTGA AAGAAGAAGA CGGCATCGTT CTGAAGCTGA TCAACATGGG TGGCGGCTTC CCGGCCAACT ACATCACCCG TACCAACAGC CTGGAAACCT ACGCTGAAGA AATCATCCGC TTTCTGAAGG AAGACTTCGG TGATGACCTG CCGGAAATCA TTCTGGAGCC AGGCCGTTCG CTGATCTCCA ATGCCGGTAT TCTGGTCAGC GAAGTCGTGC TGGTCGCGCG CAAGTCGCGC ACCGCCGTCG AGCGTTGGGT CTACACCGAC GTGGGCAAAT TCTCCGGCCT GATCGAAACC ATGGACGAAG CCATCAAGTT TCCGATCTGG ACCGAAAAAA AAGGCGAGAT GGAAGAAGTG GTCATTGCCG GCCCGACCTG CGACAGCGCC GACATCATGT ACGAGAACTA CAAGTATGGC CTGCCGCTCA ACCTGGCCAT CGGTGACCGT ATGTACTGGC TGTCGACCGG CGCCTACACT ACCAGCTACA GCGCGGTGGA GTTCAACGGC TTCCCGCCGC TGAAATCGTT CTACCTGTAA
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Protein sequence | MVIDTAIISK AYDDLRAGFD FAKVYYAVKA NPAVEVINLL KDKGSSFDIA SIYELDKVLS CGVGPERMSY GNTIKKSKDI RYFYEKGVRL FATDSEADLR NIAKAAPGAK VYVRILTEGS TTADWPLSRK FGCQTDMAMD LLILARDLGL VPYGISFHVG SQQRDISVWD AAIAKVKVIF ERLKEEDGIV LKLINMGGGF PANYITRTNS LETYAEEIIR FLKEDFGDDL PEIILEPGRS LISNAGILVS EVVLVARKSR TAVERWVYTD VGKFSGLIET MDEAIKFPIW TEKKGEMEEV VIAGPTCDSA DIMYENYKYG LPLNLAIGDR MYWLSTGAYT TSYSAVEFNG FPPLKSFYL
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