Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4518 |
Symbol | |
ID | 1186201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5088445 |
End bp | 5093706 |
Gene Length | 5262 bp |
Protein Length | 1753 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637395859 |
Product | non-ribosomal peptide synthetase, initiating component |
Protein accession | NP_794271 |
Protein GI | 28871652 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [COG1020] Non-ribosomal peptide synthetase modules and related proteins |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACAAAC CAACTGCGCT GCACTTCAAC ACTTTTCTGG ATGTTGTCCG CTATCGAGCA ACGCATGACT CAGTCAATGC CGAGCGTCTG GCCTTTACTT ACCTGGCTGA CGGCGAGTCG GTCAGTGATA GTCTGACCTA CGTTCAACTG GATCAAAAAG CACGTAGCCT GGCGGCTCAC TTACAACGCC ACACTCGACC TGGCGATCGG GTATTGCTGG TGTACCCACC GTGTATGGAA TACACCATTG CCTTTTATGC CTGCATCTAC GCTGGCGTCA TTGCGGTTCC AGCACTGTCG CCGGCCAACG CCAAGACGTT GCCTCGCCTG CATCTGATTG CACAGGACTC ACAGCCAGCA CTTGCCTTGA CGATGGATGC GGTTTTGACT GGGCTGCAAC GCATAGTCAC TGACGACAAC ACGCCCAACC TGCTCACGGA CATCACCTGG CTGTCCAGCA ACCTGCTCGT GGATGCCAGC GCCGACTGGC AATGCCCGCC GACCGTGGCG AGCGACATCG TATTTTTGCA GTACACATCA GGGTCGACCG GAGCGCCCAA AGGGGTGATG GTCAGCCACG CCAATCTGCT GGCCAATGTG GAACTGTCAA AACAGACCTA CCGGATACGC GAGCAGGATG TCTTCGTCTC CTGGCTGCCG GCCCATCACG ATTTCGGGCT GATCGGTGCG ATCATTCTTC CGGTCTACAT GGCCAGCCAT TGCGTGCAGT TCCCGCCTGC GGCATTTGTC ATGCGCCCCT ACCGTTGGTT GAAATTGATT TCAGACTACC GGGCACGCAT CACCGGCGGC CCCAACTTCG CCTTCCAGCT GTGCGTCCAG CGCGTCACTG AAGAGCAGAA ACAAAGCCTT GACCTTGGTT CACTGGAAAT TGCGGTCAAC GGGGCTGAGC GAATTCGTCC GGGCACTCTG AGGTCGTTCG TGGAAGCGTT TTCCGGCTGT GGTTTAAAAC CCCATGCCAT GGTTCCCGCT TACGGCATGG CCGAGTCCGT ACTGTTGGTG ACGGCCAATA CGCAGACCCC GATCGGACAA TTGCCGCGTA TGCGCACTAT CAGCAAAAGT GCGCTGGAAA ATGGCCAGGT CAGGCCCGAA CGGCATGCCA CCGACGCAGT GGAGCTAGTG GCCACGGGCA CCGAAATCAC AGGCGATCAC CGGGTCGGGA TTTTCCATCC GCAGCACGCC TTACGGCTCG CGGCGCAGCA GGTGGGTGAA ATATGGATCA GCGGTCCGTC AACCGCCCGC AGTTACTGGC GGCAAGAGGC TGAAAGCCAG GTTTTCAATA CCCGTGCAGA GGGCGATGAA ACTCGCTGGT TCCGTACCGG GGACTTGGGT TTCGTCAATG ACGGCGATCT TTATATTACT GGCCGCCTCA AGGAGGTGAT GATCTTTAGT GGGCGAAATA TTTACCCTCA GGACATCGAG ATAACGGTCG AAGCCATCGA CCCGGCATTT CGCGCCAATG GCTGCGCGGC CTTCTCCATC GAGAACGGCG AGGTCAGTCA ACTGGTGGTC GTGCAGGAGT TGGAGTCACG CCAACACGTT GAATTCGACA GCGTGATGCC CCGCCTGCGG GCCGAACTGG CAGATCGTCA TGAAGTCTTC GATCTGGCGG CAGTGCTTCT GGTCAAGACG GGTACGCTGC CGAGAACTTC CAGCGGCAAG ATTCAGCGGG CTCGCTGCAG AGACCTGTTC GAAGCTGCAG AGCTGAAGCC GATATGGTCA TGGAGCCGGG AAGATGAAGG CCATCAGGCG GACACCCGGA GCAGCGCGCA CCTTACAGAA ATAGAGGCGC AGCTGTTATC CATTTGGCAA ACGACACTGG ATCGACAGGA TATTTCCAGT ACTGACAGTT TCTTCTTGCT GGGTGGTCAT TCGTTGCTGG CCACACAGAT GATGATGGAG GTTCGCAAGC GCTTCAATGT CGACCTGGCG CTCAGTGTGC TCTTCCATTC GCCGACACTC CACCAACTGG CAGCTGAAAT CTCCAACGCA CGGCCCCCAT CTGGCCAATC TCTGCCAGCC ATTGCCCGCG CGCCTCACCA AGTACCTGTA CCGCTGTCCT ATGCACAGCA ACGTTTCTGG TTTCTCGACC AGTACCAGCC CGACAACCCG TTCTATTCGC TGCCTCTGGC GCTGACCATC GACGGGCCGC TGGACGCAGA AATCGTCCAG CAGGTCGTGA ACCTGCTGGT TATGCGCCAC ACGCCATTAA GAACCCTGTT CAAGCGCGAA GGCGGTGTGC TTCAGCAGCA TATTCTGCCG GTACTGAAGG TCCCGGTAAC TCATGTCGAC TTCAGTCAAT CGGGGGACCA GGCGGCCTGC GCAATTGCCG AGGCCATTCG CCAGGAGGCT TATCAACCGT TCAATCTGGC ACAAGGCCCA CTGATTCGCG CCCGCCTGTT GCAAAGTGCC CCACAGCGCC ATGTCCTGCT GTTGACCTTG CATCACATCA GTTGCGATGG CTGGTCGAGC AATGTGCTGC AACATGAGTT CTCGGCCCTC TATGACGCGC TTGTACATGA CCAGCCTGCG GCGCTGCCTG CGTTGCCCTT CGAGTACACT GATTACACGC TGTGGGAGCA GCAGCACATC GCTGGCCCAT GGCTTGAGGA GAAACTGGCG TTCTGGCGTG CGCACTTGGC CAATGCTCCG ACGTCACTGG ATCTGCAGAC TGATTTTCCA CGCCATGAGA ACACCCGTCA GGAAGGCGAT GTGCGCACGA TTCAGGTGCC GCAGGAATTG GTGCGACAAC TCGAAACGTT TGCCCGCCTG AACAACGCCA CAGTCTTCAT GGTGATGGTG ACTGCCATGA ATGTCCTGTT GCAACGCATG ACCGGACAAA GAGATCTGTG CATCGGCGTG ATGTCGGCGA ATCGCCCGGA AGGGACCGAG GGGTTGATCG GCAATTTCAT CAACGTAGTG CCTCTATACA GTCACATCAA AGGGGACGAG GCGTTCAGCA ACCTGTTGAA AACCACCTCC CGGCAATTAC TGGCTGCCTA TGACCAGCAG ATTCCTTTCG AGCTGATCCT CAAGCATCTG GCGCCACCCA GACAGACCGG CGGTACGCCT TACGCTCAAT TCGTGATGAA CTTCCACAAC GAAATAGCCG AACCCACGCC GCGGCCAGGG CTGCAGAGAA GCAGTGGGGT AAGCCTCGTT GGCCATCACC CGAGTACTGT GAACCACGCA GCGTTCGAGT TGAAAATGGA GGTGCATTCA ACGACACGAA ACCTGTCCAT CGCGTTTGAG TACAACAAGG AACTGTACAC ACCGTCGACC ATCGACCGCG TGATGAATCA CTTCCTCGTT CTGCTGACCG GTGCGACTGG CCAGCCCCAG GTGCCGGTCA ACACCCTGCC TCTGCTGCAT GAGAACGAGC GACGACAGCT GACCAGTCTG TGGAACGATA CCGATCGGGA CTATCCGCTC GGGCAAACAC TTCATGGCTT GTTCGAGCAG CAGGTCGAAC GCACGCCCGA GGCTATCGCG CTGGTCTTCG AGGCAGAGCA ACTGAGCTAC TCTCAACTCA ATACACGGGC CAACCAGTTG GCCCACCGCC TGCTCGACTA TGGCGTGGGG CTCGATTCAC GAGTGGCTCT GTGCATCGAA CGCAGCGCGC AGATGGTCAT CACGCTAATG GCCATTCTCA AGGCAGGCGG CGCCTACGTG CCCCTTGATC CCGGCTACCC CACCGAGCGT CTGGCCTACA TGCTCGACGA CTCCAAACCT GACGTGCTGG TCTCTCAAGA GAGCGTGCGA GACTGTTTGC CCGAGCATTC AGTACCGACC CTATGGCTGG AGACCGAAGA GCAGGAGATC GCCGGATGCT CATCCCATAA CCTGACAATC GGCGATACCG ATAGCTTGGC CTACTGTATT TATACTTCCG GTTCCACAGG CCGCCCGAAA GGCGTGATGA ACGCTCATGG CGCTGTCGTC AATCGGCTGC AATGGATGCA AGAGCAGTAC GCCCTATCGA ACCAGGACCG CGTATTGCAA AAGACGCCTT TCTCGTTCGA TGTCTCGGTC TGGGAGTTCT TCTGGCCGCT GATCCAGGGC GCCCGGCTGG TGATCTGCAA ACCCGAGGGG CACAAAGACC CGTCCTATCT ATGGAACCTG ATCGGTCAGC AGGGCGTGAC AACCGCGCAC TTCGTGCCTT CAATGTTGCA AGCCTTTCTC AAAACCGGGC CAGCACAACC CGCCGACTCA TTACGTCACG TATTCAGCAG TGGTGAAGCA CTCCCGGTGG CGGTGGCCAA CGAGTTCCTC GAACGCTACC GGCACACGCG TCTGCACAAC CTCTACGGAC CGACCGAAGC GGCCGTGGAC GTCTCTTATT GGGAATGCCA ACCCGATTAT CGCCATCCAC TCGTGCCGAT TGGCCGCCCA GTGGCCAACA CCCGTTTGTA CATTCTGGAC GAGACTCTGC AGCCAGCCCC TATCGGGGTC ATCGGCGATC TCTACATCGC CGGGGTGCAG CTGGCCCGAG GCTACTTCGG GCGTCCCGAT CTGACCGCAG AACGTTTTAT TCCGGACCCG AACGACAACC ACGGTGGCCG GATGTACCTC ACCGGAGATC GTGGCCGTTA TCTGCCATCA GGTGATATCC AATACCTGGG GCGTATCGAT CATCAGATAA AGATCCGTGG TTTCCGCATC GAACCGGGCG AGATCGAGAA TGCCTTGCTG CAGTGCCCAA CGGTGCGTGA AGCCGTAGTT GTCCCCAGGG ACGATGCGTT TGGTGGCCAA TACCTTGTGG CCTACATTGC ATCCAGTGTG AGCGAACCGG ACGCTGCGCA ACTGCGTAAA CAGATCGGAA AAATACTGCC CGACTATATG CAGCCGAGCT TTTACGTTGT TCTTGCCGCG TTGCCACTGA GCGCTAACGG AAAGATCGAT CGACAGGCGC TACCGCCCCA CGAGCAAATT GCCCAGTCGC TCGCCCGGGA TTATCTGGCG CCGACCACCG CAACCGAAAA AAGTCTGGTC AGCCTTTGGC AAGAGACGCT GAAGGTCCCC CGCGTTGGCA TCAACGACAG CTTCTTCGAA CTGGGCGGGC ACTCCCTGCT GGCAACCCAG ATTCTCGCCA GCGTCCAGCA GACCTTTTCG GTCAGCCTGC CGCTGAAGCA TCTATTCGAA TCGCCAACGG TCGCGGCCAT GGCGGCTTAC ATCGATCAGG CGGCACGAAC ACCACGCGCG TCGGCACCGC CAATCAAGCG GCTGACGCGT AACCAGACCT GA
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Protein sequence | MDKPTALHFN TFLDVVRYRA THDSVNAERL AFTYLADGES VSDSLTYVQL DQKARSLAAH LQRHTRPGDR VLLVYPPCME YTIAFYACIY AGVIAVPALS PANAKTLPRL HLIAQDSQPA LALTMDAVLT GLQRIVTDDN TPNLLTDITW LSSNLLVDAS ADWQCPPTVA SDIVFLQYTS GSTGAPKGVM VSHANLLANV ELSKQTYRIR EQDVFVSWLP AHHDFGLIGA IILPVYMASH CVQFPPAAFV MRPYRWLKLI SDYRARITGG PNFAFQLCVQ RVTEEQKQSL DLGSLEIAVN GAERIRPGTL RSFVEAFSGC GLKPHAMVPA YGMAESVLLV TANTQTPIGQ LPRMRTISKS ALENGQVRPE RHATDAVELV ATGTEITGDH RVGIFHPQHA LRLAAQQVGE IWISGPSTAR SYWRQEAESQ VFNTRAEGDE TRWFRTGDLG FVNDGDLYIT GRLKEVMIFS GRNIYPQDIE ITVEAIDPAF RANGCAAFSI ENGEVSQLVV VQELESRQHV EFDSVMPRLR AELADRHEVF DLAAVLLVKT GTLPRTSSGK IQRARCRDLF EAAELKPIWS WSREDEGHQA DTRSSAHLTE IEAQLLSIWQ TTLDRQDISS TDSFFLLGGH SLLATQMMME VRKRFNVDLA LSVLFHSPTL HQLAAEISNA RPPSGQSLPA IARAPHQVPV PLSYAQQRFW FLDQYQPDNP FYSLPLALTI DGPLDAEIVQ QVVNLLVMRH TPLRTLFKRE GGVLQQHILP VLKVPVTHVD FSQSGDQAAC AIAEAIRQEA YQPFNLAQGP LIRARLLQSA PQRHVLLLTL HHISCDGWSS NVLQHEFSAL YDALVHDQPA ALPALPFEYT DYTLWEQQHI AGPWLEEKLA FWRAHLANAP TSLDLQTDFP RHENTRQEGD VRTIQVPQEL VRQLETFARL NNATVFMVMV TAMNVLLQRM TGQRDLCIGV MSANRPEGTE GLIGNFINVV PLYSHIKGDE AFSNLLKTTS RQLLAAYDQQ IPFELILKHL APPRQTGGTP YAQFVMNFHN EIAEPTPRPG LQRSSGVSLV GHHPSTVNHA AFELKMEVHS TTRNLSIAFE YNKELYTPST IDRVMNHFLV LLTGATGQPQ VPVNTLPLLH ENERRQLTSL WNDTDRDYPL GQTLHGLFEQ QVERTPEAIA LVFEAEQLSY SQLNTRANQL AHRLLDYGVG LDSRVALCIE RSAQMVITLM AILKAGGAYV PLDPGYPTER LAYMLDDSKP DVLVSQESVR DCLPEHSVPT LWLETEEQEI AGCSSHNLTI GDTDSLAYCI YTSGSTGRPK GVMNAHGAVV NRLQWMQEQY ALSNQDRVLQ KTPFSFDVSV WEFFWPLIQG ARLVICKPEG HKDPSYLWNL IGQQGVTTAH FVPSMLQAFL KTGPAQPADS LRHVFSSGEA LPVAVANEFL ERYRHTRLHN LYGPTEAAVD VSYWECQPDY RHPLVPIGRP VANTRLYILD ETLQPAPIGV IGDLYIAGVQ LARGYFGRPD LTAERFIPDP NDNHGGRMYL TGDRGRYLPS GDIQYLGRID HQIKIRGFRI EPGEIENALL QCPTVREAVV VPRDDAFGGQ YLVAYIASSV SEPDAAQLRK QIGKILPDYM QPSFYVVLAA LPLSANGKID RQALPPHEQI AQSLARDYLA PTTATEKSLV SLWQETLKVP RVGINDSFFE LGGHSLLATQ ILASVQQTFS VSLPLKHLFE SPTVAAMAAY IDQAARTPRA SAPPIKRLTR NQT
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