Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_4481 |
Symbol | |
ID | 1186162 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 5045558 |
End bp | 5046574 |
Gene Length | 1017 bp |
Protein Length | 338 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637395821 |
Product | hypothetical protein |
Protein accession | NP_794235 |
Protein GI | 28871616 |
COG category | [R] General function prediction only |
COG ID | [COG1092] Predicted SAM-dependent methyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTTCCC TGAATCAGGC GCTCAGCGTC GCCCTCGATA ATCGTCGACC GTTGCTTGCC GAACTGCACA CGCAAGGCAC GGACTGCTAT CGCCTGTTTC ATGGCAGCCA GGAAGGCGCC AGCGGCCTGA CCATCGACCG CTACGGTCCG CAATTGCTGG TACAGAGCTT TCACGCCAGC CTGGATCGCG AGGCTTTGCT CGCCGTGCAT GCGCAGATCA ATACCTACTT GGGCGTGGAA ACACTGCTGG TCTACAACGA TCGCTCGCAG GGCAATTCGC GGGTGGACCG TGAGGACACC GTCTACAAGG CCGAAGAAGC GGCCCTGGCC GATCATGTCG GGCATGAATG GGGGCTCAAT TACCGGGTTC GGGGGCGGCA CGCCGGTCAG GACCCGCTGT TGTTTCTCGA CCTGCGCAAC ACGCGCGGCT GGGTCAAGCA GCACAGCGCC GGCAAAAGCG TGCTGAACCT GTTCGCCTAC ACCTGCGGTG TCGGCCTCAG CGCTGCAGCC GGCGGCGCCA GCGAGGTGTG CAATCTGGAC TTCGCCGAAG GCAATCTGGC CGTGGGCCGC GAAAACGGCG CGCTCAACCC ACAGCTGCCG ACCATGCAAT TCATTCAGTC CGATTACTTC CCGGCGATCC GTCAACTGGC CGGGTTGCCT GTCGCCGCGC GGCGCAGCCA GCAATTGCCC AGCTATGTGA AACTGCAGCC GCGCCACTAT GACCTGGTTC TGCTCGACCC GCCCGCCTGG GCCAAGAGCG CATTCGGCAC CGTTGACCTG TTGCGCGACT ATCAAAGCCT GCTCAAACCG GCCCTGTTGG CGACGGCAGA TGGCGGCGTG CTGATCTGCT GCAACAATCT GGCAAAGGTC AGCATGCAAG ACTGGCGCGA GCAAGTGCTG CGCTGCGCCA CCAAAACCGG TCGCCCGGTC CGTGACTGGC AAGAGATGCT GCCTGCCGGG GACTTTCCGT CTCAGGACAA TCAGCCACCG TTGAAGACGC TGATCCTGCA ACTCTGA
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Protein sequence | MSSLNQALSV ALDNRRPLLA ELHTQGTDCY RLFHGSQEGA SGLTIDRYGP QLLVQSFHAS LDREALLAVH AQINTYLGVE TLLVYNDRSQ GNSRVDREDT VYKAEEAALA DHVGHEWGLN YRVRGRHAGQ DPLLFLDLRN TRGWVKQHSA GKSVLNLFAY TCGVGLSAAA GGASEVCNLD FAEGNLAVGR ENGALNPQLP TMQFIQSDYF PAIRQLAGLP VAARRSQQLP SYVKLQPRHY DLVLLDPPAW AKSAFGTVDL LRDYQSLLKP ALLATADGGV LICCNNLAKV SMQDWREQVL RCATKTGRPV RDWQEMLPAG DFPSQDNQPP LKTLILQL
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