Gene PSPTO_4481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4481 
Symbol 
ID1186162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp5045558 
End bp5046574 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content63% 
IMG OID637395821 
Producthypothetical protein 
Protein accessionNP_794235 
Protein GI28871616 
COG category[R] General function prediction only 
COG ID[COG1092] Predicted SAM-dependent methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCCC TGAATCAGGC GCTCAGCGTC GCCCTCGATA ATCGTCGACC GTTGCTTGCC 
GAACTGCACA CGCAAGGCAC GGACTGCTAT CGCCTGTTTC ATGGCAGCCA GGAAGGCGCC
AGCGGCCTGA CCATCGACCG CTACGGTCCG CAATTGCTGG TACAGAGCTT TCACGCCAGC
CTGGATCGCG AGGCTTTGCT CGCCGTGCAT GCGCAGATCA ATACCTACTT GGGCGTGGAA
ACACTGCTGG TCTACAACGA TCGCTCGCAG GGCAATTCGC GGGTGGACCG TGAGGACACC
GTCTACAAGG CCGAAGAAGC GGCCCTGGCC GATCATGTCG GGCATGAATG GGGGCTCAAT
TACCGGGTTC GGGGGCGGCA CGCCGGTCAG GACCCGCTGT TGTTTCTCGA CCTGCGCAAC
ACGCGCGGCT GGGTCAAGCA GCACAGCGCC GGCAAAAGCG TGCTGAACCT GTTCGCCTAC
ACCTGCGGTG TCGGCCTCAG CGCTGCAGCC GGCGGCGCCA GCGAGGTGTG CAATCTGGAC
TTCGCCGAAG GCAATCTGGC CGTGGGCCGC GAAAACGGCG CGCTCAACCC ACAGCTGCCG
ACCATGCAAT TCATTCAGTC CGATTACTTC CCGGCGATCC GTCAACTGGC CGGGTTGCCT
GTCGCCGCGC GGCGCAGCCA GCAATTGCCC AGCTATGTGA AACTGCAGCC GCGCCACTAT
GACCTGGTTC TGCTCGACCC GCCCGCCTGG GCCAAGAGCG CATTCGGCAC CGTTGACCTG
TTGCGCGACT ATCAAAGCCT GCTCAAACCG GCCCTGTTGG CGACGGCAGA TGGCGGCGTG
CTGATCTGCT GCAACAATCT GGCAAAGGTC AGCATGCAAG ACTGGCGCGA GCAAGTGCTG
CGCTGCGCCA CCAAAACCGG TCGCCCGGTC CGTGACTGGC AAGAGATGCT GCCTGCCGGG
GACTTTCCGT CTCAGGACAA TCAGCCACCG TTGAAGACGC TGATCCTGCA ACTCTGA
 
Protein sequence
MSSLNQALSV ALDNRRPLLA ELHTQGTDCY RLFHGSQEGA SGLTIDRYGP QLLVQSFHAS 
LDREALLAVH AQINTYLGVE TLLVYNDRSQ GNSRVDREDT VYKAEEAALA DHVGHEWGLN
YRVRGRHAGQ DPLLFLDLRN TRGWVKQHSA GKSVLNLFAY TCGVGLSAAA GGASEVCNLD
FAEGNLAVGR ENGALNPQLP TMQFIQSDYF PAIRQLAGLP VAARRSQQLP SYVKLQPRHY
DLVLLDPPAW AKSAFGTVDL LRDYQSLLKP ALLATADGGV LICCNNLAKV SMQDWREQVL
RCATKTGRPV RDWQEMLPAG DFPSQDNQPP LKTLILQL