Gene PSPTO_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4262 
Symbol 
ID1185943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4801709 
End bp4802299 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content52% 
IMG OID637395607 
Producttranscriptional regulator, TetR family 
Protein accessionNP_794021 
Protein GI28871402 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATCA CGACAAAAGC CGCGCTGCTG AGCTACGCGG AAACCCAGAT GCGTTCAAAG 
GGTTACTCAG CGTTCAGTTA TGCGGATCTC GCAGCGAAAG TCGGCATCAG AAAAGCCAGC 
ATTCACCATC ACTTCCCTAC CAAGGAGTGC CTGGGTGCAG AGCTGATCAA CGATTACATC 
AATCGTTTCA ACGAGACGTT GGCGTCAATC GAAACTATGC ATCCCGAGCC GCTAAAGCGT 
CTGCAAGCAT TTTCCCAACT TTTTGTAATG AGCGCGAATG AAGGGCTACT GCCGTTATGT 
GGAGCCTTGG CTGCCGAAAT GGCTGCACTG CCTTTGTCGC TTCAAGGGCT CACTCGGGAC 
TTCTTCAACG CTCAACTCGA CTGGCTACAG AGCACCCTCA GTCAGGCAGT TCGGCAACAC 
AACTGGTCGC TGGAAACACC TCTTGAAAAC TTCGCCTTCA TGCTGCTCAG CTCCTTGGAG 
GGCGCAAGCC TTATCGATTG GACGCTAGGC CGAACAACAG ATCCTCTGGC TGGCTTTAAC 
CATTTGCTTG AAATGGCTGC CATGCGGTCT TCATTTCTCT GCGCAGGCTA A
 
Protein sequence
MSITTKAALL SYAETQMRSK GYSAFSYADL AAKVGIRKAS IHHHFPTKEC LGAELINDYI 
NRFNETLASI ETMHPEPLKR LQAFSQLFVM SANEGLLPLC GALAAEMAAL PLSLQGLTRD 
FFNAQLDWLQ STLSQAVRQH NWSLETPLEN FAFMLLSSLE GASLIDWTLG RTTDPLAGFN 
HLLEMAAMRS SFLCAG