| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_4183 |
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| Symbol | rpmE-1 |
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| ID | 1185863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4713249 |
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| End bp | 4713530 |
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| Gene Length | 282 bp |
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| Protein Length | 93 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395529 |
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| Product | ribosomal protein L31 |
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| Protein accession | NP_793944 |
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| Protein GI | 28871325 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.280608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAACCCG ATATCCATCC CGCTTACCGC ACCGTACTGT TCCACGACAC CGCTGCCGAT
GCCTATTTTC TGATCGGCTC CACCGTGGAC ACCGACCGCA CGCAGCAACA CACCGACGGC
ACGACCTACC CTTATGTCGC GCTTGACGTG TCCAGCGCCT CGCACCCGAT GTACACCGGG
CAGCAGCGCA AGACCACCAC CGAAGGCCGG ATCGCCGGTT TCAACAAGCG TTTCGCCAGC
TTCGGCTCTG GCAGCAACAA AGAAACCGCT GCAACGCAAT GA
|
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| Protein sequence | MKPDIHPAYR TVLFHDTAAD AYFLIGSTVD TDRTQQHTDG TTYPYVALDV SSASHPMYTG
QQRKTTTEGR IAGFNKRFAS FGSGSNKETA ATQ
|
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