| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3162 |
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| Symbol | |
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| ID | 1184819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3554994 |
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| End bp | 3555698 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394518 |
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| Product | hypothetical protein |
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| Protein accession | NP_792952 |
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| Protein GI | 28870333 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0308091 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCGCAC AGTGGAAGGT CAAGCATAAA GAAGCGGCAG CGAATGCCAA GGGACGTACG
TTTGGCAAGC TGTCCAAGGA GATCATGATC GCGGCCCGCG CAGGTGCAGA CCCGGACATG
AACTCGCGTC TGCGCCTGGT GGTGGAGCAG GCGAAAAAGG CTTCGATGCC ACGCGAAACC
CTGGAACGTG CCATCAAGAA AGGCGCCGGT TTGCTGGGCG AGAGCGTCAA CTTCGAGCGC
CTGACCTACG AAGGTTTTGC ACCGCACCGC GTGCCGGTGA TCGTCGAGTG CCTGACTGAC
AACATCAACC GCACAGTCTC GGAAATTCGC GTGTTGTTTC GCAAAGGCCA GTTGGGCGCT
GCGGGTTCGG TTTCCTGGGA TTTTCTGTAT CAGGGCATGA TCGAAGCGGT GCCCACGGCG
CCGGACGCTG ATGCCGATGA AGCCGCTATC GAGGCCGGTG CTCAGGACTG CGAGCCGGGT
GAAGAGGGCG CGACGCTGTT CCTGACCGAG CCTACCGACA TGGACGCCGT CTGCAAGGCG
CTCCCGCAAT TCGGCTTTGC CGTCCAGTCC GCGCAATTGG GCTATCGCCC GAAAAGCACC
GTGGATGGCC TGAGCGATGA GCAAATGGCC GAAGTCGAAG CGTTTCTTGA AGCCATCGAC
AACCATGACG ACGTACAGAA CGTGTACGTC GGTCTGGCGG GCTGA
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| Protein sequence | MGAQWKVKHK EAAANAKGRT FGKLSKEIMI AARAGADPDM NSRLRLVVEQ AKKASMPRET
LERAIKKGAG LLGESVNFER LTYEGFAPHR VPVIVECLTD NINRTVSEIR VLFRKGQLGA
AGSVSWDFLY QGMIEAVPTA PDADADEAAI EAGAQDCEPG EEGATLFLTE PTDMDAVCKA
LPQFGFAVQS AQLGYRPKST VDGLSDEQMA EVEAFLEAID NHDDVQNVYV GLAG
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