Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2934 |
Symbol | |
ID | 1184588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3298155 |
End bp | 3299129 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637394295 |
Product | urea amidolyase-related protein |
Protein accession | NP_792732 |
Protein GI | 28870113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1984] Allophanate hydrolase subunit 2 |
TIGRFAM ID | [TIGR00724] biotin-dependent carboxylase uncharacterized domain |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.131824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCAAGG TACTCAAACC CGGTCTGGCC ACCTCGGTAC AGGACCTCGG CCGTGAAGGC TATTACCACC TGGGCATCCC GCCTTCGGGT GCGCTGGACC AGTACGCACT CAGCGCCGCC AATCAACTGG TCGGCAATCC GCCCGGCGCT GCCGGCCTGG AATGCACGTT GCTGGGGCCT GAGCTGGAAT TTCAATCCGA CACCTTGGTG GCCGTCTGCG GTGCGCACAT GACGGCGCGC CTGGACGGCG TGGACATGCA CCATGACACC GCGTTTGCGG TAAAAGCCGG GCAGGTGTTG CGCTTTGATT TCCCCAAAGA TGGCGCACGC ACTTATCTGG CCGTCGCGGG CGGCATTGAT GTGCCGCTGG TATTGGGCAG CCGCTCGACC TACACGCTGG GCGCACTCGG TGGTTTTCAG GGGCGCAGGC TGGCGGTTGA TGACCTGTTG CCGATAGGCG TGCCCAGCGG CAAGGGGCGT GCAGGGGCCA GCCTGCCGAT GGCGTTGCGC CAGTCGCTGG GCGGCGAAAT CTACCTGCGC GTCGTTCCCG GCCTGTATTA CGAGCGCCTG ACCGAGTTTG CGGCCACCAG CTTCTTTTCC GAGTCATGGA CGGTTGGCTC GGAAGCCGAC CGCATTGGTT ATCGCTTCAA GGGCGGCAGG GCGCTGACTT TTCAGCCACG GGAACAGCCA TTCGGGGCAG GTTCCGATCC ATCGAATATC GTCGACAGTT GCTACCCGAT CGGCTCGATT CAGGTTCCGG CAGGACTGGA GCCCATTGTG TTACACCGCG ACGCGGTGTC TGGTGGAGGC TATGCCATGA TCGGCACCGT GATCAGCGCC GACCTTGATC TGATCGGCCA GATGCAGCCC AACCAGAAAG CCCGGTTTGT GGCGGTCACG CTGGAAGATG CACTCGCAGC GCGCACGTCC TACAAGAAGA AGTTGGCGTG TTTGAGCAGG TTGTTCGCAT CTTGA
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Protein sequence | MIKVLKPGLA TSVQDLGREG YYHLGIPPSG ALDQYALSAA NQLVGNPPGA AGLECTLLGP ELEFQSDTLV AVCGAHMTAR LDGVDMHHDT AFAVKAGQVL RFDFPKDGAR TYLAVAGGID VPLVLGSRST YTLGALGGFQ GRRLAVDDLL PIGVPSGKGR AGASLPMALR QSLGGEIYLR VVPGLYYERL TEFAATSFFS ESWTVGSEAD RIGYRFKGGR ALTFQPREQP FGAGSDPSNI VDSCYPIGSI QVPAGLEPIV LHRDAVSGGG YAMIGTVISA DLDLIGQMQP NQKARFVAVT LEDALAARTS YKKKLACLSR LFAS
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