Gene PSPTO_2843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2843 
Symbol 
ID1184497 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3194491 
End bp3194874 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content56% 
IMG OID637394209 
Producthypothetical protein 
Protein accessionNP_792646 
Protein GI28870027 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00037044 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGT CCCTACCCAA TCGTTCGCTC GTTGCATGGG CACTTTACTT TTGCGTGCTG 
TTAAATGTGT TCGCTTGTGG TTTGGGTCAT GGCCAGATGA GCGGGTTCGC ACTCAATGGT
ATCGGCGGTG AGTTTTGCTC TGTATCAGGT GGCAAGGCCC CGATCGCCAG TGCGGATTTC
TCTGACCAGT CGCCCAGCGG TTGGGCCGGT AGTCTTGTCT GCCCTATCTG TTCTGCTGTG
ACATTAAGCA TCGTTTTTCT GCTGCGCCTG ATCTGGCTGT TGCGAATCGT CCAGAAGCCA
CGCCTTGGTC GTGAGCTTCG CTGCAAGGCA CCCCCTCGAT ACTCTTGGCC GTCGGCCAAC
CCTCGCGCTT CTCCCCTGAT CTGA
 
Protein sequence
MKLSLPNRSL VAWALYFCVL LNVFACGLGH GQMSGFALNG IGGEFCSVSG GKAPIASADF 
SDQSPSGWAG SLVCPICSAV TLSIVFLLRL IWLLRIVQKP RLGRELRCKA PPRYSWPSAN
PRASPLI