| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2728 |
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| Symbol | |
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| ID | 1184382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3025774 |
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| End bp | 3026796 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394097 |
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| Product | peptidase, U7 family |
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| Protein accession | NP_792534 |
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| Protein GI | 28869915 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGATTTTG TTGTCGATTA CGCAAGTTTT CTGGCCAAAA CCGTCACGCT GGTGATCGCC
ATCGTTGTGG TGCTGGTTGC AATTGCGGCC GTGCGTGGCA AGGGGCGTCG CAAATCAGCC
GGGCAATTGC AGGTCACCCG GCTCAATGAC TTCTATAAAG GACTGCGCGA GCGACTGGAA
CAATCGCTGC TCGACAAGGA CCGCCTCAAG GCTTTGCGCA AGGAGCAGGG CAAGGCACTG
AAAAAAGACA AGAAGCTCGC CGAGCCCAAG GCGCGTGTCT ACGTGCTGGA TTTCGACGGT
GACATCAAGG CGTCGGCGAC CGAAAGCATG CGTCACGAGA TCACGGCGCT GCTGACGCTG
GCCACTGACA AGGACGAAGT GGTCCTGCGT CTGGAGAGCG GTGGCGGCAT GGTGCATAGC
TACGGACTGG CGTCCTCGCA ACTGGCGCGC ATTCGTCAGG CGGGCATTCC GTTGACTGTG
TGCATCGACA AGGTCGCGGC CAGCGGCGGT TACATGATGG CCTGCATCGG CAACAAGATC
ATCAGCGCGC CGTTCGCCAT TCTCGGCTCT ATCGGCGTCG TGGCGCAGTT GCCCAACGTC
AATCGCCTGC TGAAGAAACA CGACATCGAT TTTGAAGTGC TGACCGCCGG CGAGTACAAA
CGCACCCTGA CCGTATTTGG CGAAAACACT GAAAAGGGCC GCGAGAAATT CCAGCAGGAC
CTGGACATCA CTCACGACCT GTTCAAGAAC TTCGTCGCCA GCTACCGTCC GCAACTGTCC
ATCGACGAAG TTGCTACCGG CGAAGTGTGG CTGGGCATGG CGGCAGTCGA CAAACTGCTG
GTAGATGAAC TGAAAACCAG CGACGAATAC CTGGCCGAAC GTGCCAGACA GGCCGACGTG
TTTCACCTGC ACTACGTGCA ACGCAAGAGC TTGCAAGAGC GCATGGGCAT GGCGGCTGCG
AACTCGGCGG ATCAACTGGC TACCAAGTGG TGGGGGCGTT TGACCCAGCA GCGATTCTGG
TAG
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| Protein sequence | MDFVVDYASF LAKTVTLVIA IVVVLVAIAA VRGKGRRKSA GQLQVTRLND FYKGLRERLE
QSLLDKDRLK ALRKEQGKAL KKDKKLAEPK ARVYVLDFDG DIKASATESM RHEITALLTL
ATDKDEVVLR LESGGGMVHS YGLASSQLAR IRQAGIPLTV CIDKVAASGG YMMACIGNKI
ISAPFAILGS IGVVAQLPNV NRLLKKHDID FEVLTAGEYK RTLTVFGENT EKGREKFQQD
LDITHDLFKN FVASYRPQLS IDEVATGEVW LGMAAVDKLL VDELKTSDEY LAERARQADV
FHLHYVQRKS LQERMGMAAA NSADQLATKW WGRLTQQRFW
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