Gene PSPTO_1729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_1729 
Symbol 
ID1183366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp1896253 
End bp1897215 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content60% 
IMG OID637393101 
Producthypothetical protein 
Protein accessionNP_791554 
Protein GI28868935 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.35536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACATCT CGTCTGGTCG CTGGGTCTAT GGCCTGTGCC TGTCACTGTT GACCGCGCTG 
CTTTGGGGCA TTCTGCCCAT CAAGCTCAAA CAGGTTCTGC AGGTCATGGA CCCGGTCACC
GTGACCTGGT TTCGTTTGTC TGTTTCCGGC GCGCTATTGT TCATCTGGCT GGCGTCGGTC
AAGCGCCTGC CCAGCTTCAA AGTGCTGGGC CGCAAAGGCA AAGTGCTGGT GCTGCTGGCG
GTGTTCGGGC TGGTCGGCAA CTACGTGCTG TACCTGATCG GCTTGCGCCT GCTGAGCCCT
GGCACCACGC AATTGCTGGT GCAGGTGGGC CCGATCTTCC TGCTGGTCAG CAGTATTTTC
CTGTTCAAGG AGCGTTTCAG TCTGGGGCAG GGCGTCGGTT TGCTGGTGCT GCTGATCGGC
TTCGGCTTCT TCTTCAATCA GCGTCTGGTG GAGTTGTTCA CCTCGTTGGG TGATTACACC
ACCGGCGTGC TGATCATTCT GCTGGCTTCG ACGATCTGGA CCTTCTATGG CTTGAGTCAG
AAACAGTTGC TGACCGTGTG GAATTCGCTG CAGGTCATGA TGGTGATCTA CCTGTTCTGT
GCGCTGTTGC TCACGCCGTG GGCGCATCCT GCCGAGGCGT TGCTGTTGAG CCCGTTACAA
GGTTGGTTGC TGCTGGCTTG CTGCCTGAAC ACGCTGGTGG CCTATGGCGC TTTTGCCGAG
GCGCTGGCGC ATTGGGAGGC GTCGCGGGTC AGTGCGACGC TTGCGCTCAC GCCTTTGGTC
ACGCTGGCTG CGGTGGCAAG CGCCGCGTGG TTCTGGCCCG ACTATGTGCA GGCTGAAGAG
TTAAATGTGC TGGGTTACGG CGGCGCATTG CTGGTGGTGC TAGGGTCTGC GCTGACCGCG
CTGGGCCCTT CGCTGGTTGC CGGCCTCAGG GCACGAAAGG CGAGGCTGGC GCAGGTTTCC
TGA
 
Protein sequence
MHISSGRWVY GLCLSLLTAL LWGILPIKLK QVLQVMDPVT VTWFRLSVSG ALLFIWLASV 
KRLPSFKVLG RKGKVLVLLA VFGLVGNYVL YLIGLRLLSP GTTQLLVQVG PIFLLVSSIF
LFKERFSLGQ GVGLLVLLIG FGFFFNQRLV ELFTSLGDYT TGVLIILLAS TIWTFYGLSQ
KQLLTVWNSL QVMMVIYLFC ALLLTPWAHP AEALLLSPLQ GWLLLACCLN TLVAYGAFAE
ALAHWEASRV SATLALTPLV TLAAVASAAW FWPDYVQAEE LNVLGYGGAL LVVLGSALTA
LGPSLVAGLR ARKARLAQVS