Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1729 |
Symbol | |
ID | 1183366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1896253 |
End bp | 1897215 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393101 |
Product | hypothetical protein |
Protein accession | NP_791554 |
Protein GI | 28868935 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.35536 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACATCT CGTCTGGTCG CTGGGTCTAT GGCCTGTGCC TGTCACTGTT GACCGCGCTG CTTTGGGGCA TTCTGCCCAT CAAGCTCAAA CAGGTTCTGC AGGTCATGGA CCCGGTCACC GTGACCTGGT TTCGTTTGTC TGTTTCCGGC GCGCTATTGT TCATCTGGCT GGCGTCGGTC AAGCGCCTGC CCAGCTTCAA AGTGCTGGGC CGCAAAGGCA AAGTGCTGGT GCTGCTGGCG GTGTTCGGGC TGGTCGGCAA CTACGTGCTG TACCTGATCG GCTTGCGCCT GCTGAGCCCT GGCACCACGC AATTGCTGGT GCAGGTGGGC CCGATCTTCC TGCTGGTCAG CAGTATTTTC CTGTTCAAGG AGCGTTTCAG TCTGGGGCAG GGCGTCGGTT TGCTGGTGCT GCTGATCGGC TTCGGCTTCT TCTTCAATCA GCGTCTGGTG GAGTTGTTCA CCTCGTTGGG TGATTACACC ACCGGCGTGC TGATCATTCT GCTGGCTTCG ACGATCTGGA CCTTCTATGG CTTGAGTCAG AAACAGTTGC TGACCGTGTG GAATTCGCTG CAGGTCATGA TGGTGATCTA CCTGTTCTGT GCGCTGTTGC TCACGCCGTG GGCGCATCCT GCCGAGGCGT TGCTGTTGAG CCCGTTACAA GGTTGGTTGC TGCTGGCTTG CTGCCTGAAC ACGCTGGTGG CCTATGGCGC TTTTGCCGAG GCGCTGGCGC ATTGGGAGGC GTCGCGGGTC AGTGCGACGC TTGCGCTCAC GCCTTTGGTC ACGCTGGCTG CGGTGGCAAG CGCCGCGTGG TTCTGGCCCG ACTATGTGCA GGCTGAAGAG TTAAATGTGC TGGGTTACGG CGGCGCATTG CTGGTGGTGC TAGGGTCTGC GCTGACCGCG CTGGGCCCTT CGCTGGTTGC CGGCCTCAGG GCACGAAAGG CGAGGCTGGC GCAGGTTTCC TGA
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Protein sequence | MHISSGRWVY GLCLSLLTAL LWGILPIKLK QVLQVMDPVT VTWFRLSVSG ALLFIWLASV KRLPSFKVLG RKGKVLVLLA VFGLVGNYVL YLIGLRLLSP GTTQLLVQVG PIFLLVSSIF LFKERFSLGQ GVGLLVLLIG FGFFFNQRLV ELFTSLGDYT TGVLIILLAS TIWTFYGLSQ KQLLTVWNSL QVMMVIYLFC ALLLTPWAHP AEALLLSPLQ GWLLLACCLN TLVAYGAFAE ALAHWEASRV SATLALTPLV TLAAVASAAW FWPDYVQAEE LNVLGYGGAL LVVLGSALTA LGPSLVAGLR ARKARLAQVS
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