Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1669 |
Symbol | tdcD |
ID | 1183306 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1836085 |
End bp | 1837308 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637393041 |
Product | propionate kinase |
Protein accession | NP_791494 |
Protein GI | 28868875 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.575965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGATC AATCACAACC CTTGCTGCTG GTGCTCAACA CAGGTTCTTC CAGCATCAAG TTCTCTCTGT ACAGCGCGGC GGCGCTGGCA GCGTCCGGGC CGCAGTGCCT GGGCAATGGC AGTTTCGAGG TGCGCAAGGA CACTGAAAGG TTGATCTTTC AGGGCGCTGA CGGTTGTGCG CAAACGCGCG AGGAGTGGTC ACGCAACGGT GCCTCGTTAA ACAAGGCCTC GGTAAATAGC GGCACGCTGG CCAACCTGAT GGGCTGGATC GAGCGCCACG CAGACGGGCA GATTTGCGCC GCGGCGCACC GTGTCGTTCA TGGGGGTAGC CGCACGCAAG TGGCGGCGCG GGTCGATGCT GTGCTCATGG CTGACATGCA GGCGCTTGTT CCGCTGGCGC CCTTGCATCA GCCGTTGTGC CTGGCACCCA TGACCTATTT GAGCCGTGAG CACGGCGGGC TGGTGCAGTT TGCCTGTTTC GATACCGCGT TTCACCACAC TCTGGACGCG CTCGAAACCC GTTTCGGCCT GCCTGCGGCG CTCACCGCGC AGGGCCTTCG GCGCTATGGC TTTCACGGCT TGTCTTACGA ATACATCGCC AGCGTGCTCC CGCACTACGA TCAGCGTGCG GCACAAGGGC GGACAATCGT TGCTCATCTG GGCAATGGCG CAAGTTTGTG CGCGATGCAC AACCGGGTCA GTCGCGGCAC AACCATGGGC TTCAGTACCC TGGACGGTGT GCTGATGGGA ACGCGCCCGG GGCGCCTGGA CCCCGGCGTG CTGCTGTACC TGCTGCGCGA GCGCCGCATG AGTGTGCAGG CGCTGGAGCA TTTGCTGTAT CACGAATGCG GGCTGTTGGG CGTTTCCGGT GGCATTTCCA GTGACATGCG CGAGCTGTCT GCCAGCCAGG CCCCAGAGGC GCGAGACGCC ATTGCGTTGT TCGTGCGCAG TGTGGTGCGC GAGATTGGCA GCCTGGCCGC GATTCTGGGC GGTGTTGATG CGCTGGTCTT TACCGGCGGC ATCGGTGAGC ACGCTGCCGA CGTGCGCGAC GCGATTCTTG ACGGTTGCGC CTGGCTGGGC CTCAAGCGCG ACAGGGCGGT AGCGACTCAG CCTGGCGCCC GACTGTCGCA CCCCGACAGC GCTGTTTCGG CCTGGACGAT CGCCACCGAC GAGAACGCCA TCATCGCCCG CCATGCGCTC GGGCTGCTGC ACGAGCGCAC CTGA
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Protein sequence | MTDQSQPLLL VLNTGSSSIK FSLYSAAALA ASGPQCLGNG SFEVRKDTER LIFQGADGCA QTREEWSRNG ASLNKASVNS GTLANLMGWI ERHADGQICA AAHRVVHGGS RTQVAARVDA VLMADMQALV PLAPLHQPLC LAPMTYLSRE HGGLVQFACF DTAFHHTLDA LETRFGLPAA LTAQGLRRYG FHGLSYEYIA SVLPHYDQRA AQGRTIVAHL GNGASLCAMH NRVSRGTTMG FSTLDGVLMG TRPGRLDPGV LLYLLRERRM SVQALEHLLY HECGLLGVSG GISSDMRELS ASQAPEARDA IALFVRSVVR EIGSLAAILG GVDALVFTGG IGEHAADVRD AILDGCAWLG LKRDRAVATQ PGARLSHPDS AVSAWTIATD ENAIIARHAL GLLHERT
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