Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1454 |
Symbol | |
ID | 1183091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 1595545 |
End bp | 1596534 |
Gene Length | 990 bp |
Protein Length | 329 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392827 |
Product | hypothetical protein |
Protein accession | NP_791280 |
Protein GI | 28868661 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.929699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCCAA ATACCGTGCC TACGCCTGCC CGCGGCGCCA TTCGTTGGGA GGCCCATACC TGCCTGCCGC TGCTGCCCAA TCAGGACATG TCTGCGCTGC TGCGCTACCG CGACAACGGC TTTCACCACG TCTCGGTCAA TGTCGGCATG GACATGACCG CTGTTGGCGA TGTGATGCAG GTCATCGCAG GCTTTCGCCA GTGGCTGATC AAGCATCCAG AGAACTTCAT GCTGGCCGGT ACCCTTGCAG ATCTGCAACG CGCCCGCGTG CAGGACAAGC TGGCAGTGTC TTTCGACTTG GAAGGCTCCA ACATGCTGCT GCAAGACCAG GCAATGGTCC GCTTGTATGC CGACCTGGGC GTCCGCCAGA TGCTTCTGGC GTACAACCTC GATAACAGCT GTGCGGGCGG TTGCCACGGC AGTGGCATGG GATTAACCGC GCTGGGGCGG GAGTTTGTGG GAGCCATCAA TTCGGCGGGT ATCGTGATGG ACTGCTCACA TGCCAGCAAG CGCGCGAGTA TGGAAATAAT CGAGCTGTCA CAGCGACCGG TTGTCTTTTC ACACACTAAT ATCAAGGCAG TGTATGACCA TCCACGCACG GTGGATGATG AGCAGATCAT GGCCTGTGTT GAATCAGGTG GTGTGATCGG GCTGACCGGT ATGGGGATTT TTCTGGGCGA TCCGCAGGCA TCGGTCGAAG CCTTCGTGCG CCAAATCGAT TATCTGGCCG AACGAGCGGG AACGGCACAT ATCGGCCTGG GCCTGGACAT CGAACTGCAC CCCGACGATA AGGATTTGGC CGAGGGCGTG AATGAAGACG ATTGGTGGCC AAAAGAATTC TATGGCGGCA TCAACGGGCA TCGTCAACTG CAGCCGGAAG CGCTGGGTCA GGTCGCAGAA GCATTGCTAC GGATTGGCTA TGACGCCGCG CAGATCAACG GCATTTTTGG CGGCAACTTT ATGCGGGTCG CTCAGGCCAC TTGGCCATAA
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Protein sequence | MNPNTVPTPA RGAIRWEAHT CLPLLPNQDM SALLRYRDNG FHHVSVNVGM DMTAVGDVMQ VIAGFRQWLI KHPENFMLAG TLADLQRARV QDKLAVSFDL EGSNMLLQDQ AMVRLYADLG VRQMLLAYNL DNSCAGGCHG SGMGLTALGR EFVGAINSAG IVMDCSHASK RASMEIIELS QRPVVFSHTN IKAVYDHPRT VDDEQIMACV ESGGVIGLTG MGIFLGDPQA SVEAFVRQID YLAERAGTAH IGLGLDIELH PDDKDLAEGV NEDDWWPKEF YGGINGHRQL QPEALGQVAE ALLRIGYDAA QINGIFGGNF MRVAQATWP
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