| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1216 |
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| Symbol | |
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| ID | 1182852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 1331262 |
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| End bp | 1332209 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392593 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791048 |
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| Protein GI | 28868429 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACACCC TGCAAAACAT GCGCGCTTTC AGCAGCGTGG CACAGGCGGG CAGCTTCACC
GCCGCCGCTG CCGTGCTGGA CACCACGACC GCCAACGTCT CGCGCGCTGT GTCCAACCTT
GAAGCGCACC TGCAGACCCG GCTGCTCAAC CGCACCACAC GACGCATTGC TCTCACCGAA
GCGGGCAAGC GTTACCTGTT GCGCTGCGAG CAGATTCTGG CCTCGGTCGA GGAAGCCGAG
GCCGAAGCGA GCGACGCCCA TGCAAGGCCC GCCGGGCAGC TCAAGGTGCA TTCGATGCCG
GGTGTCGGTC AGCACTATGT GATCGATGCC ATTGCCCGCT ATCGGCGCAA CCACCCGGAC
GTCGCCTTCG ACCTGACCAT GACCCACCGG GTGCCAGACT TGCTGGAAGA AGGCTTCGAC
GTGTCGATCG TGCTGGCCAG CGAACTGGCC GATTCGGGCT TTGTGTCGCA ACGCCTGGGC
ATTACCTACA GCATCGTGTG TGCATCCCCC GAGTACGTCA AAACCTTCGG CATGGCGCAC
AAGCCCGCAG ACCTTTTGAA CCATGCGTGC CTGCGCCTGG TGAGCCCGGT GTTCCCGCTG
GACAAATGGC TGTTCGACGG CCCGGAAGGC CAGGAGATGG TCACCATCAA CAGCTCGCCG
TTGCTGGTCA ACTCGGCGGA CGCCATGAAG ACCGCGATTT CCAGCGGCAT GGGCATCGGT
ATCCTGCCGA TCTACTCGGC CATCGAAGGC TTGCGCAACG GCACGCTGGT GCGCGTACTG
TCCGACTATC GCTCGCAAGA GCTGAACCTG TACGCCATCT ACCCGTCGCG CCAGTACCTG
GACGCCAAGA TCAGGACCTG GGTCGAATAC CTGCGCGGCT CGCTGCCGGA AATCCTCGCG
GCCGATGAAG CCGACTTGCA CGTACAGGCA CTCAAAGCGT CCTGCTGA
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| Protein sequence | MDTLQNMRAF SSVAQAGSFT AAAAVLDTTT ANVSRAVSNL EAHLQTRLLN RTTRRIALTE
AGKRYLLRCE QILASVEEAE AEASDAHARP AGQLKVHSMP GVGQHYVIDA IARYRRNHPD
VAFDLTMTHR VPDLLEEGFD VSIVLASELA DSGFVSQRLG ITYSIVCASP EYVKTFGMAH
KPADLLNHAC LRLVSPVFPL DKWLFDGPEG QEMVTINSSP LLVNSADAMK TAISSGMGIG
ILPIYSAIEG LRNGTLVRVL SDYRSQELNL YAIYPSRQYL DAKIRTWVEY LRGSLPEILA
ADEADLHVQA LKASC
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