| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_0524 |
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| Symbol | |
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| ID | 1182133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 572573 |
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| End bp | 573871 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637391891 |
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| Product | peptidase, M20/M25/M40 family |
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| Protein accession | NP_790372 |
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| Protein GI | 28867753 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAT GTATTGCTCT GCTCCTTACT CTGGTCGTCT GCGAAGGTGC ATTGGCAGGA
ACGGCACGTG ATGAACAGAA CATCACGTCT TACATCGACA GTCACGGCAC CGAACAGATC
GCGTTGCTTG AGAAGCTGGT CAACATCAAC AGCGGGACAG ACAACGTTGA GGGTGTCGTC
AAGGTCGGTA ACCTGATCAA GCCGGAGCTG GAGGCGTTGG GTTTCGAGAC CGCCTGGCAC
GACCTGCCCT CGGCAATGAA CCATGCCGGC AGCCTTGTCG CTGTGCATGA CGGCAGCAAG
TCTGCAAAAC GTATTCTGCT GATAGGCCAT CTGGATACGG TCTTTCCTCA AACAAGCCGC
TTTCAGACGT TCGCTTACCT GGACGGCGGC AAAAAAGCCA AGGGCCCCGG CGTCATTGAT
GACAAAGGCG GCGTGGTCAC GATGCTTTAT GCATTGCAGG CGCTCAAGCA CAGCGGCGCG
CTGGAAAAGA TGAACATCTC GGTAGTCTTG ATAGGCGATG AAGAGCTGGC GGCCAAACCG
ACCGAGATTT CCAGAGAGTG GCTGATCGCC GAAGCCAAAA GAAGCGACAT TGCGCTGGGC
TTCGAATTCG CCTTGTCGCC CAATCAACTG ATCACCGAGC GAAGAGGGCT GAGCGAATGG
TTTTTGACCA GCACCGGCAT CGACAAACAT TCAGCGACGA TCTTTCAGCC TGAGACCGGT
TTTGGTGCGA TGTACGAGTC GGCCCGAGTG CTTGACGAGA TTCGTCAGAA ACTGTCGAAC
GAGCAGGGCC TGACCATCAA TCCGGGACTC ATTCTGGGCG GCTCAACGGC TGTGGAAGAT
AGCGCCAGTG GGCAAGGCAC GGCTTCTGGA AGAAAGACAA CAGTTGCCCG GATCACGTCG
GTGCATGGTG ATTTGCGCTT CAGCAGTGAA GACCAGAGGG CCTCTGCGGA AACCCGAATG
AAGGACATAG CCAGTCACCC GCTGCCGCAG ACCAACAGCG ACCTGAAAAT AAAAGCCATC
ATGCCGGTCA TGGCGGATCG CGAAAGCAAT CGCCAACTAC TGGCAGCCTA CAGTCAGGTC
AGCCAGGATC TCGACGGACC TGCTTTGGAG TCGGCGCCTT CAGCAGAACG AGGCGGCGCA
GATATTTCCT ATGTGAACAA GTATGTGACT GCGAGCCTGG ACGGTCTTGG TGCGTGGGGG
GCAGGTGCGC ACAGTGAAAA TGAAACCATC GAGTTGGGCT CCTTGCCCGT GGTGACGAAA
CGGGCGGCTA TTTTCCTGAG CCGCTATGGT AACCAGTGA
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| Protein sequence | MKKCIALLLT LVVCEGALAG TARDEQNITS YIDSHGTEQI ALLEKLVNIN SGTDNVEGVV
KVGNLIKPEL EALGFETAWH DLPSAMNHAG SLVAVHDGSK SAKRILLIGH LDTVFPQTSR
FQTFAYLDGG KKAKGPGVID DKGGVVTMLY ALQALKHSGA LEKMNISVVL IGDEELAAKP
TEISREWLIA EAKRSDIALG FEFALSPNQL ITERRGLSEW FLTSTGIDKH SATIFQPETG
FGAMYESARV LDEIRQKLSN EQGLTINPGL ILGGSTAVED SASGQGTASG RKTTVARITS
VHGDLRFSSE DQRASAETRM KDIASHPLPQ TNSDLKIKAI MPVMADRESN RQLLAAYSQV
SQDLDGPALE SAPSAERGGA DISYVNKYVT ASLDGLGAWG AGAHSENETI ELGSLPVVTK
RAAIFLSRYG NQ
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