Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_0150 |
Symbol | |
ID | 1181758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 174152 |
End bp | 174586 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637391527 |
Product | lipoprotein, putative |
Protein accession | NP_790009 |
Protein GI | 28867390 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCCAAGCC GTTTTCTCAC TTTAACAATC GCATTCACCC TCGCAACCCT CGCCGGATGC GCCGGCCCCC TGCCTGCGGT TGATCCAAAC ATGGCGTGGA TCGACATGCG CACACTCACC GGCCAGTTGA TCATGGCCGA CAAACTGGAT GGCAAGAACA CCTACGACGG GCGCTATTTT CAGGTGACGC CGGGCAGCCA TGAGTTGCAG GTGCGTTATG ACTACGAATA CCGCTCAGGC GGGATGGGGA TGATCGGTGA TGAGTACACC GAGATCACCT GTTACGTCAG TGTTCGTTAC AAGCACTTCG CTGCAGGGCA GCACTACATG CTGGAGGTGC GCTCACTGGC GAACAGTGTC GACGCCTGGC TTTACGATGA GAAACGCAAC GTAGTGGCCG AAGAGGAAGA AGAGGGCGGT GTGCACTGCA TCTGA
|
Protein sequence | MPSRFLTLTI AFTLATLAGC AGPLPAVDPN MAWIDMRTLT GQLIMADKLD GKNTYDGRYF QVTPGSHELQ VRYDYEYRSG GMGMIGDEYT EITCYVSVRY KHFAAGQHYM LEVRSLANSV DAWLYDEKRN VVAEEEEEGG VHCI
|
| |