| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_2907 |
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| Symbol | |
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| ID | 1170596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3034793 |
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| End bp | 3037447 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637344722 |
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| Product | TonB-dependent receptor domain-containing protein |
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| Protein accession | NP_718479 |
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| Protein GI | 24374436 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGCTA ATTCAACATT AACCAAAGCG GTTCGCTTTG CTTTAATTGG TGGTGCCACT
ACAGCGGCTC TATCTACAAT GTCAGTTTTT GCAGCTGAAG ATGATAACGC TAAGGTTGAA
CGTATTGAAG TGACTGGTTC TCGTATTCAG AGAACAGATA TGGAATCAGC ACTACCAGTG
ACAGTGTTGT CAGCGGAAGA TATTGCTAAG ACGGGTTTAA GCGATGTATC AGCAGTTTTA
GCGCAGATGC CATTTAACAC GGCGGGTAGT TTCATTAGTG ATGCTGGTAG CTCTGCGAGT
AACCATGCAA GTTCAGGTAT GCGTGGTTTA GGTTCAAACC GCACCTTAAC GCTGATCAAC
GGACGTCGAA TTGCACCATC AGCAACTTTT GGTGGCGATG CAACCAACCT CAATTTAATC
CCAATGGATG CTATTGAGCG TATCGAAATA TTACGCGATG GTGCATCAGC AATTTACGGT
TCAGATGCTA TCGGCGGTGT AATTAACATT ATTCTCAAGA AAACCTTCGA TGGTTTAGCA
TTCGACGCAA AATTTGGTAA TCCAACTCAA GGCGGTAGAG ATGAAAAATC AGCTTCTGTC
ACTTTCGGTA ATACCAGCGA TAAAAGCAGC AGCTTAGTAA TCATCGAACA CAAGCAATTT
GATCCACTCG AAGGCGGTCA ACGTCCTCAT TTAACGGCTA ACTGGGACGA AAAATACGGT
CGCAGTGCTT TATATGCACC TGAAGGAACA TATCGTCCAG TAGCTTCTCG CCCAATAAAA
GGCGCAGATG GTACATTTAG CGATCCTGTA TACACTGGTT TACAAGTGCC AGGTAAAGAC
TGTCCTGCGG ATCGCATAGT CACCAGCAAA GCAGGTTCAG CTTGTGGCTT TAATCACTTT
GACGGAACAG ACTATTTACC CGATCAGACA AAAGATTCTG TCTTCTCAAA TATGACTTAT
CGTATTACTG ATGAATTAGA GTGGTTTGGT CAAGCAATTG TTATGCGTGA CAAATCAATC
ACGTCTTCTA CCGCATTATG GACACCTAAC CTGTATATCG CCGCAGATAA CCCATTAAAC
CCAACGTTTG GCACAGCTAA CGCGTCAGAA GTGCAAGCTT ACCATCGATT GAAAGGTGTA
GCAGATCGTA CAACTGAATT CGACTCAAAT GTAGTTGACG TAGTAACTGG TCTAAACCTT
GAGTTAGATG CAGGCTCTCT GAGCTGGTAT GTACAATACT CAGATCAAAT CGTGAACATT
GAAACTGACT CTTATGTATT CGAAGATAAG CTGCAAGAAG CGGTTGATAA AGGTTTGTAT
AACCCATTCG TTGAAGGTGG TAATGCGACT CAAGCCACTC TAGACACGTT CTTACACACA
GCAACTCGTA AAGCAACCTC AAATACAACT GGTACTGGCT TGTCATGGGC CGCGCTTGCA
CCAATTTCCT TACCTGGTGG TGACTTAGGT TATGCTGTTG GTATGGAATA CCAAAAAATT
GAATACAAAG ATACCCGTGA CGCGCAACAA GCAGCAGGTA ACGTATTAGG TACTTACGGT
GGCGATTCTG CAGGTGATAG AAGCTACAAA GCGGCATTCG TTGAGTTAGA ACTACCAGTA
TTAGATCACC TGAATGTGAA GCTAGCAAGC CGTTACGACC AGTATAGCTT GCCAGATGTA
GGCCAGCTTT CTAACTCCGT TAACGTTCGC TACGAAGCCT TAGATAACTT AGTGTTACGC
GCATCTTATG GCCAAGGTTT TAGAGCACCT TCACTGGATG ATTTGTTAGG TGAACCAGCA
ACCAGCTATG ACTACGTCAC CGACACAACT CTCTGCCAAA GTCTGCCAGC AGATCAGCAA
AAAGGTAACC CTGCTTGCGA AGATACCCAA TATCTGCGTA AGAGTTCAGG TAATAAAGAG
CTAGAACCAG AGAAATCTGC TCAATACTCT TTCGGCGCAG TGTGGAATAT TACTGAGAAT
ATCGATTTCG TTGTTGATTA CTACAACATT GAAATTACCG ACCAAGTAAG CTACATCGAT
GCACAAACTA TCGTTGACCT AGAAGCTATT GGTGGTTTGG GTGCTTATGA CCCTAACTAC
ATCTATGTTA AACGTAAAGC TGATGGCACT ATCGATGAGA TCGGTGCTGG CAACATCAAC
ATGGATGGCG TACAAACTTC AGGTCTTGAC GTATCATTTA CGTCAAACTT TGATTTAGCT
GACTTGGGTA CATTTAAATT TGCAGTTGAA GGCACTTATG CTCTGGAATA CACCGAGCAA
GCAAGCCCAA TTGCTAAACG TTATGATGTG TTAGGTACTA AAGGTTATCC ACCACTACGT
TTTAACACTA CATTTAGCTA TGCTATTGAT GACTTCTCTA CATCTTTGAT TGCTAAATAC
ATTGATTCCT ATGATGGTGA AACACCGCAG CAACAAGAAG TCGGTACTAA TAAGCAGGAC
TTTTCGTCGT TCACAACTTG GGATCTGACA TTTAACTACG ACTTCAACAG CTACGGCAAC
GTAACTGTGG GTGCTCGTAA CCTGTTTGAT GCTATGCCAG CTGTTAACTA CAGCTTAGGT
TACCCAGGAT ACGATACCGA TACCCACAAT ATCTTGGGTC GCGTAGTATT CGCAGGATAC
AAAGTGAAAT TCTAA
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| Protein sequence | MRANSTLTKA VRFALIGGAT TAALSTMSVF AAEDDNAKVE RIEVTGSRIQ RTDMESALPV
TVLSAEDIAK TGLSDVSAVL AQMPFNTAGS FISDAGSSAS NHASSGMRGL GSNRTLTLIN
GRRIAPSATF GGDATNLNLI PMDAIERIEI LRDGASAIYG SDAIGGVINI ILKKTFDGLA
FDAKFGNPTQ GGRDEKSASV TFGNTSDKSS SLVIIEHKQF DPLEGGQRPH LTANWDEKYG
RSALYAPEGT YRPVASRPIK GADGTFSDPV YTGLQVPGKD CPADRIVTSK AGSACGFNHF
DGTDYLPDQT KDSVFSNMTY RITDELEWFG QAIVMRDKSI TSSTALWTPN LYIAADNPLN
PTFGTANASE VQAYHRLKGV ADRTTEFDSN VVDVVTGLNL ELDAGSLSWY VQYSDQIVNI
ETDSYVFEDK LQEAVDKGLY NPFVEGGNAT QATLDTFLHT ATRKATSNTT GTGLSWAALA
PISLPGGDLG YAVGMEYQKI EYKDTRDAQQ AAGNVLGTYG GDSAGDRSYK AAFVELELPV
LDHLNVKLAS RYDQYSLPDV GQLSNSVNVR YEALDNLVLR ASYGQGFRAP SLDDLLGEPA
TSYDYVTDTT LCQSLPADQQ KGNPACEDTQ YLRKSSGNKE LEPEKSAQYS FGAVWNITEN
IDFVVDYYNI EITDQVSYID AQTIVDLEAI GGLGAYDPNY IYVKRKADGT IDEIGAGNIN
MDGVQTSGLD VSFTSNFDLA DLGTFKFAVE GTYALEYTEQ ASPIAKRYDV LGTKGYPPLR
FNTTFSYAID DFSTSLIAKY IDSYDGETPQ QQEVGTNKQD FSSFTTWDLT FNYDFNSYGN
VTVGARNLFD AMPAVNYSLG YPGYDTDTHN ILGRVVFAGY KVKF
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