| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_1482 |
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| Symbol | |
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| ID | 1169295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 1545994 |
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| End bp | 1548441 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637343415 |
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| Product | TonB-dependent receptor, putative |
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| Protein accession | NP_717099 |
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| Protein GI | 24373056 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGTAT CACAGCCTAT ATTTCGCTTA TCATTAATCA CACTCGCCTG TTTCAGCGCT
TTAGCGCAAA ACGTCTACGC CGAAAATACA TCCACTGCAC CCGACACCAA CGTCGAGCGT
ATAACGGTTT ATGGCAAACA AAACTCAGTG GTGAAGAACT CAGGACTCGC GACTAAGTCA
GATATGTCTT TGATGGAAAC ACCCGCCGCC GTGGTGGTAG TAGACCAAGA ACTGATCAGT
GCTCAAGGGG TCGATAATCT CCAAGATTTA ATTCGCAATA TCAGCGGAGT GACTCAAGCG
GGTAATAATT ACGGCATAGG TGATAACTTA GTTATCCGTG GACTTGGTGC AAACTACACC
TTTGATGGTA TGTATGGCGG TGCAGGCCTA GGCAACACCT TTAACCCAAC ACGTTCTTTA
ACCAATGTAG AATCCGTTGA AGTGTTAAAA GGCCCCGCAA CAGGCCTATA CGGTATGGGC
AGCGCAGGCG GCGTTATCAA CCTAATTGAA AAGAAACCAC AATTTGAGTC CAAGCACAAA
ATCACCACTG AAGTTGGTCA ATGGGACACC TACTCACTCG CCATCGACAG TACGGGTGGA
ATAACCGATG ATGTAGCTTA TCGTTTAGTG GCCAAAACCG CCCGCAGTGA GGGCTATCGT
GATTTAGGTG CTGACCGTGA TGAGGTTTTC GGCTCACTAA AATGGGTATT AAGTGATAGC
CAAGATGTGA TGCTGTCGGG CGCGTATATC AAAGACGCCA TTGCCGTTGA CTCTATTGGC
CATCCTATCC GTATATATAA CGCCGATTCT GTCGGCGGTA AAACCGCAGG CGAAGTGACT
TGGCAAGATT TGATTAACGA TCCAAATGGT CAAGGTATAC AACTGACCGA CGAGCAACGT
CAGCAATTAG CAGCATCACT GGCCAGTGGT GATGGCTTAA CCCCCTATGC TTTTGGTGAT
GCAGGATTAA TTTCCCCCAT GGCCAAAGAT AATGAAGGCG AAGAATTACG CTTCAAGCTG
ACCCACAATA TCTACTTTAC CGATAATCTG TTCCTCAACC AGCAATTGCA ATATCGTGAC
TACACCACAG GTTTTGCCCG TCAAACTGGC GCTTACAACT ATGTGTACTG GAATAATAAA
GGCAAGATAA ACGCAGATCC CCGCGCCCCA CTCGTTGAAA ATGGCGTGCT CTATCCCTTT
GCTGCAAGAC GTCAGGAATA CCGTAAACTC GATGCAGAAG AAACCTCATG GCAGTATTTT
GCCGACCTGC GCTATGACTT CCAAATCGGC AATATCGATA ATGAGCTTTT GGTAAATGCT
AACTACGAAG ATCGCACGAT TCGACTAGAA CAATTCTCGA TTTACGATGC GGATCAAGTC
ATTAAAGACA AGAAAAACAA CGTCATCTAC CGTGGTTCGC TGCCCTATAT TTATGATATT
CGCAATCCTA ATTGGGGAAC GGGTAAATTT GAGGACTACG ATCCACTCAA AACCGCCAAC
TACAATAAAA AAGTCAGCGC TTGGGGCTTA GGCGTGCAGC ATGTGGGTTA TTTAGGTTAT
GGCTTTACCA CTCGTGTTGG CGTGGCCTTT AACGAAATCA AACAAAGCTA TGAGCATTTA
GGTCTCGATG CGCGTTATAG CGCAGGTCAA GCGAGCCCAA CTCCTGAAGC CGATAGCAAA
GATAACGGTA TTACCTATAA CTTGGGCTTA ACCTATATGC CCATCGACGA TTTATCGTTT
TTTGTTAACC ACTCTAAAGG ACGTACCGCC TATAGCATTT TAGGCTCAAT CACAGGGAAA
AATACCGACC GCGAAGACTC AGAATCTGTC AGTAATGATC TCGGCATGCG CTTTAAAGCC
TTTGATGATC AGATGCTGGC TTCGCTCGTC TTCTTTAAAA GCTCACGGAC TAATGTCCCT
TACAACAACC CAGACTATAA CGCCGGCGTG TCAACTGCCG ATGTACCAGT GTATTTTTAC
GATGGCAGTG AAGATACCCA AGGGGTTGAG CTGGATCTCA ATGCCCACCT AAATGAGCAA
TGGCGCGTTA ACCTTAATGG CATGTATCAA GACGCAAGGG ATAAACAAAA CCCGAATGAT
AAAGCCAACT ATGACAGCCG TCAAAAAGGG GTACCTTATG TCACCGCCAG TGCTTGGGTA
ACCTATGGCG CAGACTGGTT TGCCTTATCA AGCCCAATTG AGCTGAGTTT AGGCGCCAAA
TATGTGGATG AAAGAAGCAC TCACTCAAAA GATTTTGGCA TCCCTGATGG CTATGTCCCT
AGTTATACTC TGGTAGATTC AGCAGTCAGT TACGCTACCG ACTCCTGGAA GTTACAATTG
AATATCAACA ACCTATTCAA TAAAGACTAT TACAGCAAAG CCATGTTCCT CGGCGGTATG
CCAGGCGAAG AGCGCAATGT GAAACTGCAA TATAGCTACA GTTTCTAA
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| Protein sequence | MPVSQPIFRL SLITLACFSA LAQNVYAENT STAPDTNVER ITVYGKQNSV VKNSGLATKS
DMSLMETPAA VVVVDQELIS AQGVDNLQDL IRNISGVTQA GNNYGIGDNL VIRGLGANYT
FDGMYGGAGL GNTFNPTRSL TNVESVEVLK GPATGLYGMG SAGGVINLIE KKPQFESKHK
ITTEVGQWDT YSLAIDSTGG ITDDVAYRLV AKTARSEGYR DLGADRDEVF GSLKWVLSDS
QDVMLSGAYI KDAIAVDSIG HPIRIYNADS VGGKTAGEVT WQDLINDPNG QGIQLTDEQR
QQLAASLASG DGLTPYAFGD AGLISPMAKD NEGEELRFKL THNIYFTDNL FLNQQLQYRD
YTTGFARQTG AYNYVYWNNK GKINADPRAP LVENGVLYPF AARRQEYRKL DAEETSWQYF
ADLRYDFQIG NIDNELLVNA NYEDRTIRLE QFSIYDADQV IKDKKNNVIY RGSLPYIYDI
RNPNWGTGKF EDYDPLKTAN YNKKVSAWGL GVQHVGYLGY GFTTRVGVAF NEIKQSYEHL
GLDARYSAGQ ASPTPEADSK DNGITYNLGL TYMPIDDLSF FVNHSKGRTA YSILGSITGK
NTDREDSESV SNDLGMRFKA FDDQMLASLV FFKSSRTNVP YNNPDYNAGV STADVPVYFY
DGSEDTQGVE LDLNAHLNEQ WRVNLNGMYQ DARDKQNPND KANYDSRQKG VPYVTASAWV
TYGADWFALS SPIELSLGAK YVDERSTHSK DFGIPDGYVP SYTLVDSAVS YATDSWKLQL
NINNLFNKDY YSKAMFLGGM PGEERNVKLQ YSYSF
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