Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_1421 |
Symbol | ifcA-1 |
ID | 1169240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 1479602 |
End bp | 1481371 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637343363 |
Product | fumarate reductase flavoprotein subunit |
Protein accession | NP_717041 |
Protein GI | 24372999 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGAATA CCAAATTATT ACCGTTAGCC ATGTCGGCTT TTTTTATATC AACATTTAGT TATGGACAAT CTTTATCAGA ATTCCATATT GATAAGGGTA ACAACTGCCA AACGTGTCAC ACAAAACCTA TAAAAGTTGA TGATGCAGAA AACCATGAAA ATAAGTCCTG TGAAAGTTGC CATGGAACTA TGGGCGAATT AGCTGCCAAA TCAAAATCTA AACTATCACC ACATCATAGT CATCTTATTG ATGTGTCTTG TACCAGTTGT CATTCCGGTC ATAAACAGCC GGTATTTGTT TGCCAAACTT GCCATGATTC TTTTAAAAAT GAGTTTAAAA TCCCCTTTTC TAACGATAAA CCCGTACTGG ATAACTATCA GTTTCCAGAA GTCACCCAAG AAATGATTGA AACAGCCCTT GCGAAGGCTC CACTTGAACA ACATCAAGTG ATTGTCATTG GTGCGGGAGC AGCAGGACAT GCGGCAGCCA TTTCAGCGAG GCAACATGGC GTTGCAGATG TCGTCATTCT TGAAAAACAA CCTTACATTG GTGGCAATAG CATGTTAGCT GCTGGCGGTA TGTCAGCCGC AGAAACCGTC ACACAAGCCC TTAAGCATTA CCCTGACAGT AAGGCGCTGT GGTATGAAGA TACAATGAAA GGTGGGCATA ACATAAACAA CCCTGATCTC GTTAAAATCT TGACAGAAAA CGGCAGTGCT GGTGTTGATT GGCTGCAAGC AATGGGAGCA GATTTAACGT CGGCATCAAG TGCTGGGGGA CATAATGCTG AGCGTTTACA TAGACCAACG GGTGGTGCGA AATCAGGTCC AGAAATTGTT AACACCCTAA AAGAAACCGC CCAAAAACTC GGTGTTGAAA CCCGCACCAA CAGTAAAGTC ATCCAGCTAG TGCAAAATAA ACAAGGAGTT ATTACTGGTG TCCTTGTTCA AGGCAAGCAC TCAAAATTAC ATATACTCGG TGCTAAAGCG GTCATTATCG CTTCTGGCGG CTTTGCACGA AATAACGAAT TAGTGGCTAA ATATCGCCCA GACTTAAAAG GTGTAGATGC CACTAATAAT CCAGGCAACG TCGGCGATGC GCTCACTTTC GCTCCCAAAG TCGGTGCAGA TATTGTTGAC GTCAAAGAAA TTCAAGCCTT CCCAACGGCG GCGGCAGGTA AAATGGTTAT CTCAGGCACT GCACGGGGAG CTGGCGCTAT TATGCTGAAT AATGATGGAG AACGCTTCTG CGATGAGATG GGACCAAGGG ATAAAGTCTC TGAATGTATC TGGGCGCAAA AAGGTAAAGA TGCGTGGTTA GTGTTTGATG AAACCGTCTT AGATAGGCTT GGTCAACTGC GAGGAATGTT AGATTTAGGT ATTATCTTCA AAGGCAATTC AGCTGATGAA ATGGCTAAAG CGACGAAGAT GAATGCTCAA AAATTTGACC AAGCGATAAA ACGTTATAAC GATTTTAAAG TGAAAGGCAA AGATGCAGAT TTTGCTCGTA AGAATATGGC CGATGATCTT CAATATCCTA TTTATGCGGT CAAAATTAAA CCCGCGGTTC ACCATACTAT GGGCGGCTTA AAAATTAACA CTAAAACAGA AGTCATTGAC CAGAATGGGT TACCAATAAA AGGTCTTTTT GCAGCCGGAG AAGTCACTGG AGGGGTGCAT GGTGCAAATA GATTGGCGGG CAATGCAATA GCTGACACTA TCGTATTTGG GCGAATTGCT GGAGAACAAG TAGCTAATTC TATTAAATAA
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Protein sequence | MLNTKLLPLA MSAFFISTFS YGQSLSEFHI DKGNNCQTCH TKPIKVDDAE NHENKSCESC HGTMGELAAK SKSKLSPHHS HLIDVSCTSC HSGHKQPVFV CQTCHDSFKN EFKIPFSNDK PVLDNYQFPE VTQEMIETAL AKAPLEQHQV IVIGAGAAGH AAAISARQHG VADVVILEKQ PYIGGNSMLA AGGMSAAETV TQALKHYPDS KALWYEDTMK GGHNINNPDL VKILTENGSA GVDWLQAMGA DLTSASSAGG HNAERLHRPT GGAKSGPEIV NTLKETAQKL GVETRTNSKV IQLVQNKQGV ITGVLVQGKH SKLHILGAKA VIIASGGFAR NNELVAKYRP DLKGVDATNN PGNVGDALTF APKVGADIVD VKEIQAFPTA AAGKMVISGT ARGAGAIMLN NDGERFCDEM GPRDKVSECI WAQKGKDAWL VFDETVLDRL GQLRGMLDLG IIFKGNSADE MAKATKMNAQ KFDQAIKRYN DFKVKGKDAD FARKNMADDL QYPIYAVKIK PAVHHTMGGL KINTKTEVID QNGLPIKGLF AAGEVTGGVH GANRLAGNAI ADTIVFGRIA GEQVANSIK
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