Gene SO_0996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_0996 
Symbol 
ID1168837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp1028082 
End bp1028582 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content43% 
IMG OID637342957 
Productglyoxalase family protein 
Protein accessionNP_716624 
Protein GI24372582 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID[TIGR03645] lactoylglutathione lyase family protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCGT ATCCACGTAC TTTTTCGCAT ATTGGTATTT CTGTGCCCGA CCTCGATGCC 
GCAGTGAAGT TTTACACTGA GGTACTCGGC TGGTATTTGA TTATGCAGCC CACAGAAATC 
ATCGAGGATA ATTCGGCGAT TGGTGAAATG TGTACCGATG TATTTGGCCC GAATTGGGGA 
TCTTTTAAAA TTGCCCATTT ATCAACAGGC GACAGAATTG GCGTCGAATT ATTCCAATTT 
GCTAATCAAG TAAACCCAGA GAACAACTTT GAATATTGGA AAACAGGCGT ATTCCATTTT 
TGTGTTCAAG ATCCAAACCT TGAAGAGTTA GCTGAAAAAA TTGTCGCCGC TGGTGGGAAG 
AAACGGATGA AGGCACCAAG ATATTACTAT CCAGGCGAAA AGCCGTACCG CATGATCTAT 
ATGGAAGATC CCTTTGGCAA CATTCTCGAA ATCTATAGCC ATAGTTACGA GCTACATTAT 
GCCAGCGGCG CTTATCAATA A
 
Protein sequence
MKPYPRTFSH IGISVPDLDA AVKFYTEVLG WYLIMQPTEI IEDNSAIGEM CTDVFGPNWG 
SFKIAHLSTG DRIGVELFQF ANQVNPENNF EYWKTGVFHF CVQDPNLEEL AEKIVAAGGK 
KRMKAPRYYY PGEKPYRMIY MEDPFGNILE IYSHSYELHY ASGAYQ