Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_0101 |
Symbol | fdnG |
ID | 1167998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 108703 |
End bp | 111717 |
Gene Length | 3015 bp |
Protein Length | 1004 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637342112 |
Product | selenium-containing formate dehydrogenase, nitrate inducible, alpha subunit |
Protein accession | NP_715743 |
Protein GI | 24371701 |
COG category | [C] Energy production and conversion |
COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAGAC GCCAGTTTTT TAAACTGTGT GCGGCCGGAG CGGCAACCTC AGCGATTTCA GCGCTGGGAT TGATGTCCGA AAAGGCCTAT GCAGCAGTGC GAGAGTTTAA GCTGCTCGGA GCTAAAGAAA CCCGTAACAA CTGCCCGTAT TGCTCGGTCG GTTGCGGCCT GCTGATGTAC AGCCAAGGCA GTGGGGGTAA AAACTCCGAA CATGCTATTT TCCATATCGA GGGTGATGCT GATCATCCCG TCAACCGAGG TGCATTGTGC TCGAAGGGTG CAGGACTTGT GGATTATGTC AACAGCCCAC ATCGTTTACA GTATCCAGAA TATCGCGCTC CCGGCAGTAA CAAATGGGAA CGGATCAGCT GGCAAGATGC CTTTAAGCGT ATTGCACGTT TGATGAAAGA TGACCGTGAT GCGAACCTGA TTGAAAAGAA CGCCGATGGC GTAACGGTTA ACCGTTGGTT AACCACTGGG ATGATGACGT CATCCGGTAT GGCTAATGAG AGCGGCTTAG CGACACAAAA ATTTGCTCGC GCTTTAGGCC TAGTAGCTAT CGATACTATT GCACGTAACT GACACTCCCC AACGGTAGCA AGTCTTGCTC CAACATTTGG GCGTGGTGCC ATGACCAACC ACTGGATCGA TATTAAAAAT TCTAACGTAG TGATTATTAT GGGCGGTAAT GCCGCAGAAG CTCACCCTGT CGGATTCGGC TGGGTTACGG AAGCTATGCA GCATAACAAT GCTAAGTTGA TTGTGGTTGA CCCACGTTTC AACCGCAGTG CGTCATTGGC AGATCACTAT GCCCCAATCC GCTCAGGAAC TGACATTGCA TTCCTTCTGG GTGTGATCCG TTATTTGATT TCGACCAATC AAGTTAACTT CGATTATGTG AAAGCCTATA CCAACGCCAG TTATCTGGTG CGGGATGATT TTGACTTCCA TGACGGCCTA TTCTCAGGCT TTGATGAAGC AAAAGGCGAG TACAACAAAG AATCCTGGTT CTACCAACTC GACGAAGACG GCTATGCCAT AGTGGATGAA ACACTTGAGC ACCCGCGTTG TGTGTGGAAC TTACTCAAAC AACACGTAGA ACGTTATGAT TTTGCAACGG TAAGTAATAT CACTGGTACG CCAACAGAAG ATTACCAAGT GGTATGTGAT GCCATTGCGA GCACTCATAC TAAAGATCGT GTGGCGACAT TTATGTATGC GCTGGGCTGG ACCCACCATA GTAAAGGTGC GCAGAACATC CGTTCTATGG CGATGATCCA GTTATTACTG GGCAACATAG GTCAGTTAGG CGGTGGTGTT AACGCATTGC GCGGTCATGC CAACGTTCAA GGTTCAACCG ATATGGGTCT ACTGGCTCAA AGTTTACCTG GTTACCTTAA ACTGCCAAAC GATAAAGAAC CTACCTTAGC AGCTCACTTG GCGGCGAACA CACCTAAGCC ATTGCGCCCA GGTCAAACCA ACTACTGGCA AAACTATCCG AAGTTTTATG TGTCCCTGCT CAAAGCCTTC TGGGGCGAGA ATGCGACGCC TGAAAACGAG TTCGGTTATC AGTGGTTACC TAAGTGGGAT CAAATGTATG ACTTCGGTAA GCATCTGGAC ATGATGTACC GTGGCAAAGT GAACGGTTGT ATCGTGCAAG GGGTTAACGC CATTAACTCA ATGCCAAACC GTAATAAGAA CATCAAAGCA CTGAGTAACC TTAAGTTCCT CGTAGTGCTT GATAACTTGT CATCGGAAAC CGCAACCTTC TGGCAAAACG AGCCTGGTTT TAACGAAGTC GATACCGCCA GTATTCAAAC CGAAGTATTC CGCCTACCTG CGACAGTGTT TGCGGAGGAA GAAGGTTCAA TCGTTAACTC TGGTCGTTGG ATGCAATGGC ACTATAAATG GGCTAACCCT CCTGGCGAAG CGATGTCGGA CTCAGAGATT GTCTCTGGTC TGCTGCTGGA GTTGAGAAAG TTATATCGCG AAGAGGGCGG CAAACTGCCT GAGCCGATTC AAGCGATTAA CTGGAACTAT ACCGATCCGC ACAACCCTAG CTCTATCGAG CTGACGAAAG AGTTGAATGG TTACGATGTC GCTACCAAGC GTCAGATCAG CAGCTTTGCT GAATTGAAGG CCGATGGTAG TACTGCGAGC GCCTGTTGGG TTTATGCGGG TTCTTGGACT GAAGCCGGTA ACCAAATGGC TCGCCGCGAT AACCATGATC CATCGGGTAA AGGTATTACG CCGGGTTGGG CCTTCGCATG GCCTCTTAAC CGCCGCGTCC TCTACAACCG TGCCTCCTGT GATGTGAACG GTAAACCTTG GGATGAGCAC CGTAAGATTG TCGAGTGGAA AGACGGTAAG TGGGAAGGGA TAGATGTACC CGACTTCAAT GCCAAGTTGA ATCCACAGGA AAGTGCGCAT CCTTTCATTA TGCAGGCTGA CGGCGTGGGT CGTTTCTTCG CGCTCAAACT GCTTAAGGAA GGACCGTTCC CAGAGCATTA CGAGCCAGTC GAATCGCCCA TCGGCACCAA CCCACTGCAT CCCAATGTGG TGCACAGCCC TGTGCTGCGT TGGTTCGAAG GGGTAAAAGA CACCATTGGT ACTAAAGAGG AATATCCCTA CGCCTGTACC ACTTACTCAC TCACAGAACA CTTTAACTTC TGGACGACAC ATTGCCGTTT AGCGGCGATT GCCATGCCAG AGACCTTTGT CGAAATGAAT GAGCAATTGG CGGCAGAAAA AGGCATCAAG AATGGCGATT GGGTGAAAGT GAGCTCGAAA CGCGGCCACA TTCTCACGAA AGCCTTGGTG ACTAAGCGTA TGCGCCCACT GCAGGTCAAT GGTCAAACAG TACACACGCT AGGTATTCCA CGTCACGGTA GCCATAACGC GCTTACACGT AAGTCCTATA GTTGTAACGT CCTTACCACT GAGATGGGTG ATGCCAACAC GGGTGTTCCT GAGTACAAAG CGTTCCTCGT GAATGTTGAA AAGGCGGAGG TCTGA
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Protein sequence | MNRRQFFKLC AAGAATSAIS ALGLMSEKAY AAVREFKLLG AKETRNNCPY CSVGCGLLMY SQGSGGKNSE HAIFHIEGDA DHPVNRGALC SKGAGLVDYV NSPHRLQYPE YRAPGSNKWE RISWQDAFKR IARLMKDDRD ANLIEKNADG VTVNRWLTTG MMTSSGMANE SGLATQKFAR ALGLVAIDTI ARNUHSPTVA SLAPTFGRGA MTNHWIDIKN SNVVIIMGGN AAEAHPVGFG WVTEAMQHNN AKLIVVDPRF NRSASLADHY APIRSGTDIA FLLGVIRYLI STNQVNFDYV KAYTNASYLV RDDFDFHDGL FSGFDEAKGE YNKESWFYQL DEDGYAIVDE TLEHPRCVWN LLKQHVERYD FATVSNITGT PTEDYQVVCD AIASTHTKDR VATFMYALGW THHSKGAQNI RSMAMIQLLL GNIGQLGGGV NALRGHANVQ GSTDMGLLAQ SLPGYLKLPN DKEPTLAAHL AANTPKPLRP GQTNYWQNYP KFYVSLLKAF WGENATPENE FGYQWLPKWD QMYDFGKHLD MMYRGKVNGC IVQGVNAINS MPNRNKNIKA LSNLKFLVVL DNLSSETATF WQNEPGFNEV DTASIQTEVF RLPATVFAEE EGSIVNSGRW MQWHYKWANP PGEAMSDSEI VSGLLLELRK LYREEGGKLP EPIQAINWNY TDPHNPSSIE LTKELNGYDV ATKRQISSFA ELKADGSTAS ACWVYAGSWT EAGNQMARRD NHDPSGKGIT PGWAFAWPLN RRVLYNRASC DVNGKPWDEH RKIVEWKDGK WEGIDVPDFN AKLNPQESAH PFIMQADGVG RFFALKLLKE GPFPEHYEPV ESPIGTNPLH PNVVHSPVLR WFEGVKDTIG TKEEYPYACT TYSLTEHFNF WTTHCRLAAI AMPETFVEMN EQLAAEKGIK NGDWVKVSSK RGHILTKALV TKRMRPLQVN GQTVHTLGIP RHGSHNALTR KSYSCNVLTT EMGDANTGVP EYKAFLVNVE KAEV
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