Gene BR1650 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBR1650 
Symbol 
ID1167342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrucella suis 1330 
KingdomBacteria 
Replicon accessionNC_004310 
Strand
Start bp1600198 
End bp1601109 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content58% 
IMG OID637330589 
ProductRNA polymerase factor sigma-32 
Protein accessionNP_698637 
Protein GI23502510 
COG category[K] Transcription 
COG ID[COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) 
TIGRFAM ID[TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0113806 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCAGA TGAAACTCCC AAGCATTACG TCCGGCGACG GGGGACTGAC CCGTTATCTG 
GAAGAAATTC GCCGTTTTCC CATGCTTGAG CCGCAGGAAG AATATATGCT GGCCAAGCGT
TATCACGAAC ATGCCGACCC CAAGGCCGCC CACAAGCTGG TGACGAGCCA TCTGCGCCTC
GTGGCAAAGA TTGCCATGGG CTATCGCGGC TATGGCCTGC CGATCGGCGA AGTGATTTCA
GAAGGCAATG TCGGCCTCAT GCAGGCGGTC AAGCGATTCG AGCCGGAACG TGGCTTCCGT
CTTGCCACCT ATGCCATGTG GTGGATCAAG GCTTCGATCC AGGAATATAT CCTGCGTTCG
TGGAGCCTTG TGAAGATGGG CACGACCGCC AACCAGAAGC GCCTTTTCTT CAATCTGCGC
AAGATGAAGA GCAAGATTCA GGCGCTCGAC GATGGCGATC TCAACCCGGA TCAGGTCAAG
CAGATCGCGA CCAAGCTGAA TGTCAGCGAG GACGAGGTCG TTTCCATGAA CCGCCGCTTG
TCCGGCGATG CGTCTCTCAA TGCGCCGCTG CGCGCTTCGG AAGGCGAATC GGGCGAATGG
CAGGACTGGC TCGTCGATGA CAGCAACAGC CAGGAACAGG TTCTGATCGA ACAGGACGAG
CTGGAAAGCC GCCGCTCGAT GCTGGAACAG GCGATGGAAA CCCTGAACGA CCGTGAGCGC
CGTATTTTCG AGGCTCGTCG TCTCGCCGAA GAGCCAATGA CGCTGGAAGA TCTTTCCGGT
GAATTCGGCA TCAGCCGTGA ACGCGTGCGC CAGATCGAAG TACGCGCCTT TGAGAAGGTT
CAGGCCGCCG TCAAGGCCGC GGCCCACAAG CAGCAGAAGG CGCTGAACCA TATCGAGGAA
GCGCACGTCT GA
 
Protein sequence
MAQMKLPSIT SGDGGLTRYL EEIRRFPMLE PQEEYMLAKR YHEHADPKAA HKLVTSHLRL 
VAKIAMGYRG YGLPIGEVIS EGNVGLMQAV KRFEPERGFR LATYAMWWIK ASIQEYILRS
WSLVKMGTTA NQKRLFFNLR KMKSKIQALD DGDLNPDQVK QIATKLNVSE DEVVSMNRRL
SGDASLNAPL RASEGESGEW QDWLVDDSNS QEQVLIEQDE LESRRSMLEQ AMETLNDRER
RIFEARRLAE EPMTLEDLSG EFGISRERVR QIEVRAFEKV QAAVKAAAHK QQKALNHIEE
AHV